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PLM1_100_coex_sep16_scaffold_323

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_323_1
unknown

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comp(3..146)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_323_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(211..993)
DNA (783bp) protein (261aa)
3-ketoacyl-(Acyl-carrier-protein) reductase bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_323_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(990..2633)
DNA (1644bp) protein (548aa)
Putative N-methylhydantoinase B bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative N-methylhydantoinase B
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_323_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2630..4753)
DNA (2124bp) protein (708aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_323_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4773..6038)
DNA (1266bp) protein (422aa)
Probable Leu/Ile/Val-binding protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
twin-arginine translocation pathway signal
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_323_6
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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6316..7161
DNA (846bp) protein (282aa)
Polysaccharide deacetylase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA38_SPHTD
polysaccharide deacetylase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM1_100_coex_sep16_scaffold_323_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7151..8398)
DNA (1248bp) protein (416aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003775FFC
Uncharacterized protein {ECO:0000313|EMBL:ETX06272.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
pobA; iron-sulfur protein
PLM1_100_coex_sep16_scaffold_323_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8596..9843
DNA (1248bp) protein (416aa)
Lytic transglycosylase, SLT, LysM and LysM domain-containing bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Lytic transglycosylase catalytic
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_323_9

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9928..10779
DNA (852bp) protein (284aa)
Possible 3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVK3_RHOSR
Uncharacterized protein {ECO:0000313|EMBL:KKM13411.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
3-oxoacyl-(acyl-carrier-protein) reductase
PLM1_100_coex_sep16_scaffold_323_10
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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10791..11336
DNA (546bp) protein (182aa)
Putative uncharacterized protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67M06_SYMTH
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM1_100_coex_sep16_scaffold_323_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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11391..12437
DNA (1047bp) protein (349aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361F0ED
Uncharacterized protein {ECO:0000313|EMBL:ETW95758.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_323_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(12424..13188)
DNA (765bp) protein (255aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Carboxymethylenebutenolidase, putative bin=GWC2_Chloroflexi_73_18 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM1_100_coex_sep16_scaffold_323_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13218..14063)
DNA (846bp) protein (282aa)
3-ketoacyl-ACP reductase Tax=Rhodococcus sp. R1101 RepID=UPI0002EAD535
3-ketoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_323_14
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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14356..14607
DNA (252bp) protein (84aa)
N-acetylmannosamine kinase {ECO:0000313|EMBL:KJL24383.1}; EC=2.7.1.60 {ECO:0000313|EMBL:KJL24383.1};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI0003815F87
Displaying 14 items

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