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PLM1_100_coex_sep16_scaffold_361

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_361_1
Listeria weihenstephanensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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1..105
DNA (105bp) protein (35aa)
Partition protein, ParA family Tax=Listeria fleischmannii subsp. coloradonensis RepID=H7F889_9LIST
Sporulation initiation inhibitor protein soj {ECO:0000313|EMBL:EUJ39068.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria weihenstephanensis FSL R9-0317.;"
parA; chromosome partitioning protein ParA
PLM1_100_coex_sep16_scaffold_361_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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98..958
DNA (861bp) protein (287aa)
ParBc, ParB-like nuclease domain bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ParB-like nuclease domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_361_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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969..2063
DNA (1095bp) protein (365aa)
tRNA-specific 2-thiouridylase MnmA bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tRNA-specific 2-thiouridylase mnmA
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_361_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2139..2705
DNA (567bp) protein (189aa)
Sodium-transporting two-sector ATPase (EC:3.6.3.15)
ATP synthase subunit b bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_361_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2709..3254
DNA (546bp) protein (182aa)
ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit delta bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3258..4784
DNA (1527bp) protein (509aa)
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit alpha bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4797..5684
DNA (888bp) protein (296aa)
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase gamma chain bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5856..7277
DNA (1422bp) protein (474aa)
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit beta bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7277..7690
DNA (414bp) protein (138aa)
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase epsilon chain bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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7828..8214
DNA (387bp) protein (129aa)
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain bin=bin7_NC10_sister species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
putative response regulator receiver domain protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_361_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8199..8954
DNA (756bp) protein (252aa)
Diguanylate cyclase with PAS/PAC sensor bin=GWC2_Methylomirabilis_70_24 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_361_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8929..9750
DNA (822bp) protein (274aa)
id=4140115 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_361_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9747..11273
DNA (1527bp) protein (509aa)
divJ; histidine protein kinase DivJ (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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11365..11613
DNA (249bp) protein (83aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11634..11903
DNA (270bp) protein (90aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11900..12493
DNA (594bp) protein (198aa)
ubiX; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_361_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12448..13269
DNA (822bp) protein (274aa)
Glycosyl transferase family 2 bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
family 2 glycosyl transferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_361_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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13266..13796
DNA (531bp) protein (177aa)
Oxidoreductase domain protein bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase-like protein
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 18 items

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