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PLM1_100_coex_sep16_scaffold_431

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_431_1

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comp(1..768)
DNA (768bp) protein (256aa)
Putative F420-dependent oxidoreductase Tax=uncultured bacterium RepID=K7PDW9_9BACT
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:AFK83599.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
F420-dependent dehydrogenase
PLM1_100_coex_sep16_scaffold_431_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(765..1193)
DNA (429bp) protein (143aa)
Lactoylglutathione lyase and related lyases bin=bin7_NC10_sister species=Bacillus alcalophilus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_431_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1190..2530)
DNA (1341bp) protein (447aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_431_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2826..3143
DNA (318bp) protein (106aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_431_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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3172..3657
DNA (486bp) protein (162aa)
UspA domain protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_431_6
unknown

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3773..4159
DNA (387bp) protein (129aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_431_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4216..4788)
DNA (573bp) protein (191aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_431_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(4785..5129)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI00038045C8
proline-rich region
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_431_9
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5239..7290
DNA (2052bp) protein (684aa)
Prolin-rich exported protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fecR family protein
Tax=GWA2_Rhodocyclales_65_20_curated
PLM1_100_coex_sep16_scaffold_431_10
bacterium YEK0313, Bacteria

Not on your lists

comp(7378..8184)
DNA (807bp) protein (269aa)
Binding--dependent transport system inner membrane component family protein Tax=Desulfovibrio sp. A2 RepID=G2H522_9DELT
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:CEJ11973.1}; species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport system inner membrane protein
PLM1_100_coex_sep16_scaffold_431_11
bacterium YEK0313, Bacteria

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comp(8192..8356)
DNA (165bp) protein (55aa)
ABC transporter permease Tax=Desulfovibrio desulfuricans RepID=UPI0003B6EDBA
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:CEJ11973.1}; species="Bacteria.;" source="bacterium YEK0313.;"
inner membrane component of binding-protein-dependent transport system
PLM1_100_coex_sep16_scaffold_431_12
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8353..9231)
DNA (879bp) protein (293aa)
ABC transporter permease Tax=Herbaspirillum seropedicae RepID=UPI00031E4732
ABC transporter permease {ECO:0000313|EMBL:EXU79101.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
sugar ABC transporter permease
PLM1_100_coex_sep16_scaffold_431_13
bacterium YEK0313, Bacteria

Not on your lists

comp(9445..10746)
DNA (1302bp) protein (434aa)
Glycerol-3-phosphate-binding periplasmic protein Tax=Thauera sp. 63 RepID=N6XDB5_9RHOO
sn-glycerol-3-phosphate-binding periplasmic protein UgpB {ECO:0000313|EMBL:CEJ11971.1}; Flags: Precursor;; species="Bacteria.;" source="bacterium YEK0313.;"
extracellular solute-binding family protein
PLM1_100_coex_sep16_scaffold_431_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10761..11846)
DNA (1086bp) protein (362aa)
ATPase component of ABC-type sugar transporter Tax=Herbaspirillum sp. YR522 RepID=J3HLS3_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZQ17406.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ABC transporter ATP-binding protein
PLM1_100_coex_sep16_scaffold_431_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11846..12010)
DNA (165bp) protein (55aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92804.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM1_100_coex_sep16_scaffold_431_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(12200..12337)
DNA (138bp) protein (46aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 16 items

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