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PLM1_100_coex_sep16_scaffold_438

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_438_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..108
DNA (108bp) protein (36aa)
Hypothetical membrane protein bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

105..611
DNA (507bp) protein (169aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cytochrome c class I
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

608..1753
DNA (1146bp) protein (382aa)
MopC bin=GWC2_Methylomirabilis_70_24 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
mopC; protein MopC
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1793..3019
DNA (1227bp) protein (409aa)
Molybdenum cofactor synthesis domain protein bin=GWC2_Methylomirabilis_70_24 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
molybdenum cofactor synthesis domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3235..4233)
DNA (999bp) protein (333aa)
Putative permease bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Putative transport system permease protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4321..5139
DNA (819bp) protein (273aa)
tetratricopeptide domain-containing protein bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TPR repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_438_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5235..6227
DNA (993bp) protein (331aa)
DNA protecting protein DprA bin=GWC2_Methylomirabilis_70_16 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA protecting protein DprA
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6239..8497
DNA (2259bp) protein (753aa)
DNA topoisomerase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA topoisomerase I
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8520..9392
DNA (873bp) protein (291aa)
Tyrosine recombinase XerC bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
recombinase XerC
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9409..9957
DNA (549bp) protein (183aa)
ATP-dependent protease subunit HslV bin=GWC2_Methylomirabilis_70_24 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ATP-dependent protease peptidase subunit
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9972..11321
DNA (1350bp) protein (450aa)
ATP-dependent protease ATPase subunit HslU bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11341..12240
DNA (900bp) protein (300aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12237..13439
DNA (1203bp) protein (401aa)
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11)
Acetylornithine aminotransferase bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13436..14353
DNA (918bp) protein (306aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14350..15558
DNA (1209bp) protein (403aa)
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5)
Argininosuccinate synthase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15574..16254
DNA (681bp) protein (227aa)
comB; 2-phosphosulfolactate phosphatase (EC:3.1.3.71)
Probable 2-phosphosulfolactate phosphatase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16251..16826
DNA (576bp) protein (192aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase bin=GWC2_Methylomirabilis_70_24 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16817..17419
DNA (603bp) protein (201aa)
Glycerol-3-phosphate acyltransferase 2 bin=GWC2_Methylomirabilis_70_24 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17416..18459
DNA (1044bp) protein (348aa)
glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18452..19018
DNA (567bp) protein (189aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_trna_1
unknown

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19181..19252
DNA (72bp)
transferRNA Gly
PLM1_100_coex_sep16_scaffold_438_trna_2
unknown

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19276..19348
DNA (73bp)
transferRNA Cys
PLM1_100_coex_sep16_scaffold_438_trna_3
unknown

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19379..19464
DNA (86bp)
transferRNA Leu
PLM1_100_coex_sep16_scaffold_438_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19485..19967
DNA (483bp) protein (161aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_438_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

20203..20859
DNA (657bp) protein (219aa)
resA; thiol-disulfide oxidoreductase resA bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
putative thiol-disulfide oxidoreductase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_438_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21373..22323
DNA (951bp) protein (317aa)
Hypothetical membrane protein bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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23100..23462
DNA (363bp) protein (121aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM1_100_coex_sep16_scaffold_438_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

23459..24295
DNA (837bp) protein (279aa)
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
mrp; putative ATPase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_438_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24292..24738
DNA (447bp) protein (149aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035FC3C1
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_438_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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24743..25003
DNA (261bp) protein (87aa)
ferredoxin Tax=Salisaeta longa RepID=UPI0003B6AD06
iron-sulfur protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 35 in total

View Taxonomy