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PLM1_100_coex_sep16_scaffold_457

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_457_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(30..2087)
DNA (2058bp) protein (686aa)
Putative TRAP transport system permease bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transporter TrapT family, fused dctQ-M subunits, C4-dicarboxylate transport
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_457_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2094..3071)
DNA (978bp) protein (326aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_457_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3086..4345)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4412..4645)
DNA (234bp) protein (78aa)
Transcriptional regulator, ArsR family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQ49_STIAD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADO68159.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM1_100_coex_sep16_scaffold_457_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(4771..5004)
DNA (234bp) protein (78aa)
Activator of Hsp90 ATPase-like protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094F2_STIAD
activator of hsp90 ATPase-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM1_100_coex_sep16_scaffold_457_6
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..5613
DNA (522bp) protein (174aa)
msrB; peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GVU7_CUPNN
Uncharacterized protein {ECO:0000313|EMBL:KJK24893.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
PLM1_100_coex_sep16_scaffold_457_7
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5617..6219
DNA (603bp) protein (201aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
Peptide methionine sulfoxide reductase MsrA Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5T2_NITWC
PLM1_100_coex_sep16_scaffold_457_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6455..7246
DNA (792bp) protein (264aa)
Outer membrane protein assembly factor BamD bin=GWC2_Methylomirabilis_70_16 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
competence lipoprotein ComL
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_457_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7250..8287
DNA (1038bp) protein (346aa)
Threonine aldolase bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
threonine aldolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8317..9294
DNA (978bp) protein (326aa)
Peptide ABC transporter ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9304..10278
DNA (975bp) protein (325aa)
Peptide ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptide ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10352..11248
DNA (897bp) protein (299aa)
dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.2.1.52)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase bin=GWA2_Methylomirabilis_73_35 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_457_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11254..12069
DNA (816bp) protein (272aa)
Putative esterase/lipase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
esterase/lipase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11993..12892)
DNA (900bp) protein (300aa)
Peptidase M23B bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase M23B
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12900..13325)
DNA (426bp) protein (142aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_457_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13574..14746
DNA (1173bp) protein (391aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1)
Aminotransferase class I and II bin=GWC2_Methylomirabilis_70_24 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_457_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14807..16105
DNA (1299bp) protein (433aa)
Homoserine dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hom; homoserine dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16140..17135
DNA (996bp) protein (332aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_457_19
unknown

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comp(17111..17341)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_457_20
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17495..17809
DNA (315bp) protein (105aa)
hypothetical protein bin=bin3_NC10 species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
Displaying 20 items

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