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PLM1_100_coex_sep16_scaffold_604

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_604_16S_1
unknown

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comp(1..973)
DNA (973bp)
16S ribosomal RNA (16S rRNA)
PLM1_100_coex_sep16_scaffold_604_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1257..2495)
DNA (1239bp) protein (413aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_604_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2560..4629
DNA (2070bp) protein (690aa)
Multimodular transpeptidase-transglycosylase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Multimodular transpeptidase-transglycosylase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_604_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4626..6101)
DNA (1476bp) protein (492aa)
Glycine--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycyl-tRNA synthetase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_604_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6171..6959)
DNA (789bp) protein (263aa)
DNA repair protein RecO bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA repair protein recO (Recombination protein O)
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_604_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6961..7866)
DNA (906bp) protein (302aa)
GTPase Era bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
era; GTPase Era
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_604_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(7866..8330)
DNA (465bp) protein (155aa)
metalloprotein bin=bin7_NC10_sister species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_604_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8345..9331)
DNA (987bp) protein (329aa)
PhoH-like protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phoL; phoH-like protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_604_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(9362..11050)
DNA (1689bp) protein (563aa)
Aspartate--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aspS; aspartyl-tRNA synthetase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_604_9
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11047..12297)
DNA (1251bp) protein (417aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CBL35651.1}; EC=6.1.1.21 {ECO:0000313|EMBL:CBL35651.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
Histidyl-tRNA synthetase Tax=Clostridium RepID=D6DHU4_CLOSC
PLM1_100_coex_sep16_scaffold_604_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12368..13996)
DNA (1629bp) protein (543aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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