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PLM1_100_coex_sep16_scaffold_654

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_654_1
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3..182)
DNA (180bp) protein (60aa)
Putative signal transduction protein with CBS domains Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJD9_MOOTA
signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ABC19450.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
PLM1_100_coex_sep16_scaffold_654_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(179..1180)
DNA (1002bp) protein (334aa)
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_654_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1195..1401)
DNA (207bp) protein (69aa)
id=4878371 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_654_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1551..2270)
DNA (720bp) protein (240aa)
Response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR4_9BACT
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family)
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_654_5
R_NC10_66_22, NC10, Bacteria

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comp(2260..4956)
DNA (2697bp) protein (899aa)
kdpD; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation (EC:2.7.1.-)
Sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR3_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_654_6
unknown

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5404..5496
DNA (93bp) protein (31aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_654_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5493..7418
DNA (1926bp) protein (642aa)
kdpA; high-affinity potassium transport system P-type ATPase, , A chain (EC:3.6.3.9)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Potassium-transporting ATPase A chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJC7_9BACT
PLM1_100_coex_sep16_scaffold_654_8
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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7363..9171
DNA (1809bp) protein (603aa)
kdpB; K+-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
potassium-transporting ATPase subunit B Tax=Methylococcus capsulatus RepID=UPI0002D86919
PLM1_100_coex_sep16_scaffold_654_9
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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9185..9754
DNA (570bp) protein (190aa)
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain Tax=Sorangium cellulosum So0157-2 RepID=S4XVN5_SORCE
Tax=RBG_16_Chloroflexi_54_18_curated
PLM1_100_coex_sep16_scaffold_654_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9798..10550
DNA (753bp) protein (251aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein Tax=Cellulomonas sp. JC225 RepID=UPI0002E8C12B
osmosensitive K channel His kinase sensor
PLM1_100_coex_sep16_scaffold_654_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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10586..12016
DNA (1431bp) protein (477aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_654_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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12013..15006
DNA (2994bp) protein (998aa)
Tetratricopeptide TPR_1 repeat-containing protein bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_654_13
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15145..15552)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7VBQ0_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR41898.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_654_14
unknown

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comp(15553..15711)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_654_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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15726..17273
DNA (1548bp) protein (516aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
aldehyde ferredoxin oxidoreductase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
Displaying 15 items

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