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PLM1_100_coex_sep16_scaffold_698

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_698_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..590
DNA (588bp) protein (196aa)
oxidoreductase (EC:1.14.13.-)
Flavin-dependent dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_698_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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604..1794
DNA (1191bp) protein (397aa)
Putative ABC transporter permease protein bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_698_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1796..2488
DNA (693bp) protein (231aa)
lolD; lipoprotein efflux ABC transporter ATPase, LolD (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system, ATPase component bin=GWC2_Methylomirabilis_70_24 species=Caulobacter sp. AP07 genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_698_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2485..2910
DNA (426bp) protein (142aa)
id=3609760 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_698_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2910..4763
DNA (1854bp) protein (618aa)
Glycosyl transferase, family 39 bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase 39
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_698_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4767..5135
DNA (369bp) protein (123aa)
SNARE associated Golgi protein-like protein bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
membrane-associated protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_698_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5132..6550
DNA (1419bp) protein (473aa)
Radical SAM superfamily bin=GWC2_Methylomirabilis_70_24 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Radical SAM superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_698_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6702..8288
DNA (1587bp) protein (529aa)
D-3-phosphoglycerate dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-phosphoglycerate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_698_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8321..8713
DNA (393bp) protein (131aa)
D-3-phosphoglycerate dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rfbM; phosphomannose isomerase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_698_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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8811..9167
DNA (357bp) protein (119aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_698_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(9177..9821)
DNA (645bp) protein (215aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_698_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9909..10316
DNA (408bp) protein (136aa)
Putative lipoprotein bin=GWF2_Methylomirabilis_70_14 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_698_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(10344..11852)
DNA (1509bp) protein (503aa)
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_698_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11858..14161)
DNA (2304bp) protein (768aa)
transaldolase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
transaldolase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_698_15
unknown

Not on your lists

comp(14183..14392)
DNA (210bp) protein (70aa)
carbohydrate kinase
Displaying 15 items

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