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PLM1_100_coex_sep16_scaffold_895

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_895_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..926
DNA (924bp) protein (308aa)
HNH endonuclease bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HNH endonuclease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_895_2
unknown

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979..1476
DNA (498bp) protein (166aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_895_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1651..2187
DNA (537bp) protein (179aa)
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RNA polymerase sigma factor SigW
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_895_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2180..2908
DNA (729bp) protein (243aa)
methylated-DNA--protein-cysteine methyltransferase bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
methylated-DNA--protein-cysteine methyltransferase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_895_5
unknown

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2890..3045
DNA (156bp) protein (52aa)
Protein of unknown function DUF2086
PLM1_100_coex_sep16_scaffold_895_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3021..3485
DNA (465bp) protein (155aa)
hypothetical protein; K09990 hypothetical protein bin=bin7_NC10_sister species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
proline hydroxylase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_895_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3590..4507)
DNA (918bp) protein (306aa)
Luciferase-like, subgroup bin=GWF2_Methylomirabilis_70_14 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_895_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4504..5979)
DNA (1476bp) protein (492aa)
AMP-dependent synthetase and ligase bin=GWC2_Chloroflexi_73_18 species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
AMP-dependent synthetase/ligase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_895_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6066..6782)
DNA (717bp) protein (239aa)
GlcNAc-PI de-N-acetylase family bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GlcNAc-PI de-N-acetylase family
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_895_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6827..7048
DNA (222bp) protein (74aa)
id=4676995 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_895_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7045..8523
DNA (1479bp) protein (493aa)
id=4491880 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_895_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8520..9683
DNA (1164bp) protein (388aa)
Arabinose efflux permease family protein {ECO:0000313|EMBL:KCZ70491.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Transporter, major facilitator family protein bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily protein
PLM1_100_coex_sep16_scaffold_895_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9694..12462
DNA (2769bp) protein (923aa)
UvrABC system protein A bin=GWC2_Methylomirabilis_70_16 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
excinuclease ABC subunit A
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_895_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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12459..12995
DNA (537bp) protein (179aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 14 items

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