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PLM1_100_coex_sep16_scaffold_924

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_924_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..544)
DNA (543bp) protein (181aa)
Fosmidomycin resistance protein bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
membrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_924_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(598..1071)
DNA (474bp) protein (158aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_924_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1068..2474)
DNA (1407bp) protein (469aa)
Putative MATE efflux family protein Tax=Variovorax paradoxus B4 RepID=T1XEG3_VARPD
putative MATE efflux family protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_924_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2474..2911)
DNA (438bp) protein (146aa)
hypothetical protein bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_924_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2972..3430
DNA (459bp) protein (153aa)
Transcriptional regulator, HxlR family Tax=Geobacillus RepID=E3IGU0_GEOS0
HxlR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_924_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3384..4199)
DNA (816bp) protein (272aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. WSM471 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_924_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4240..6339
DNA (2100bp) protein (700aa)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit bin=GWA2_Methylomirabilis_73_35 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
indolepyruvate ferredoxin oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_924_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6339..7874
DNA (1536bp) protein (512aa)
Putative indolepyruvate oxidoreductase subunit B bin=GWC2_Methylomirabilis_70_24 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PorG, Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_924_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8089..8475
DNA (387bp) protein (129aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA dehydratase EchA8_3 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_924_10
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8438..8800)
DNA (363bp) protein (121aa)
Transcriptional regulator, HxlR family Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVT0_PARL1
HxlR family transcriptional regulator {ECO:0000313|EMBL:GAK46677.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
HxlR family transcriptional regulator
PLM1_100_coex_sep16_scaffold_924_11
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8889..9335
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3H2B6_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM65988.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
carboxymuconolactone decarboxylase
PLM1_100_coex_sep16_scaffold_924_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9393..10685)
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_924_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(10733..11509)
DNA (777bp) protein (259aa)
Coenzyme A transferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH88_9CHLR
Coenzyme A transferase {ECO:0000313|EMBL:EFH90830.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_924_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11643..12758)
DNA (1116bp) protein (372aa)
menC; L-alanine-DL-glutamate epimerase (EC:4.2.1.-)
L-Alanine-DL-glutamate epimerase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_924_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12761..13663)
DNA (903bp) protein (301aa)
3-oxoadipate CoA-transferase (EC:2.8.3.6)
3-oxoadipate CoA-transferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH87_9CHLR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_924_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(13751..14410)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ72_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_100_coex_sep16_scaffold_924_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14634..17000)
DNA (2367bp) protein (789aa)
Carbon-monoxide dehydrogenase, large subunit Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGS3_RHOM4
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ACY49636.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
carbon-monoxide dehydrogenase, large subunit
PLM1_100_coex_sep16_scaffold_924_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17000..17470)
DNA (471bp) protein (157aa)
(2Fe-2S)-binding domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P8_SPHTD
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACZ40191.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_100_coex_sep16_scaffold_924_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(17475..18836)
DNA (1362bp) protein (454aa)
Carbon-monoxide dehydrogenase (Acceptor) Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L783_HALH1
carbon-monoxide dehydrogenase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_100_coex_sep16_scaffold_924_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18959..19537)
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTT6_9BRAD
4-carboxymuconolactone decarboxylase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM1_100_coex_sep16_scaffold_924_21

Not on your lists

comp(19778..20065)
DNA (288bp) protein (96aa)
Marine sediment metagenome DNA, contig: S01H1_S18370 {ECO:0000313|EMBL:GAG22565.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM1_100_coex_sep16_scaffold_924_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20116..20514)
DNA (399bp) protein (133aa)
id=3258370 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_924_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20498..20758)
DNA (261bp) protein (87aa)
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_924_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21253..21384
DNA (132bp) protein (44aa)
id=4531358 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inositol monophosphatase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 24 items

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