ggKbase home page

PLM1_100_coex_sep16_scaffold_968

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_968_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1030
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Marinobacter sp. ES-1 RepID=U7G3Z5_9ALTE
Transporter {ECO:0000313|EMBL:KIL02501.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
major facilitator transporter
PLM1_100_coex_sep16_scaffold_968_2

Not on your lists

1115..1783
DNA (669bp) protein (223aa)
Putative uncharacterized protein Tax=uncultured Chloroflexi bacterium HF4000_28F02 RepID=E0XW97_9CHLR
Putative uncharacterized protein {ECO:0000313|EMBL:ADI18688.1}; species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium HF4000_28F02.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_968_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2256..3839
DNA (1584bp) protein (528aa)
Alcohol dehydrogenase (Acceptor) {ECO:0000313|EMBL:CDH44399.1}; EC=1.1.99.- {ECO:0000313|EMBL:CDH44399.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
L-sorbose 1-dehydrogenase Tax=Methyloglobulus morosus KoM1 RepID=V5C679_9GAMM
alcohol dehydrogenase
PLM1_100_coex_sep16_scaffold_968_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3848..4780
DNA (933bp) protein (311aa)
rluD2; 23S rRNA pseudouridine synthase (EC:4.2.1.70 5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBK40157.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pseudouridine synthase Tax=Candidatus Nitrospira defluvii RepID=D8PA98_9BACT
PLM1_100_coex_sep16_scaffold_968_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4791..6053)
DNA (1263bp) protein (421aa)
Osmosensitive K+ channel histidine kinase KdpD Tax=Rhodovulum sp. PH10 RepID=J5PUY1_9RHOB
two component sensor histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM1_100_coex_sep16_scaffold_968_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6053..6739)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035CC41D
two component transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM1_100_coex_sep16_scaffold_968_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6749..7294)
DNA (546bp) protein (182aa)
Putative membrane-anchored protein Tax=Rhodovulum sp. PH10 RepID=J6JF82_9RHOB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM1_100_coex_sep16_scaffold_968_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7611..7799
DNA (189bp) protein (63aa)
HNH endonuclease bin=GWC2_Methylomirabilis_70_24 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 8 items

View Taxonomy