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PLM1_100_coex_sep16_scaffold_2158

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2158_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2..547)
DNA (546bp) protein (182aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-)
Long-chain fatty-acid-CoA ligase bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2158_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(810..1970)
DNA (1161bp) protein (387aa)
Cyclopropane-fatty-acyl-phospholipid synthase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cfa2; cyclopropane-fatty-acyl-phospholipid synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2158_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1967..3091)
DNA (1125bp) protein (375aa)
geranylgeranyl reductase (EC:1.-.-.-)
Geranylgeranyl reductase bin=GWC2_Methylomirabilis_70_24 species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2158_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3091..3438)
DNA (348bp) protein (116aa)
Methyltransferase, cyclopropane fatty acid synthase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cyclopropane-fatty-acyl-phospholipid synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2158_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3438..4157)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein bin=bin7_NC10_sister species=Bordetella parapertussis genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein I
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_2158_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(4162..4914)
DNA (753bp) protein (251aa)
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
livG-3; branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_2158_7
R_NC10_66_22, NC10, Bacteria

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comp(4917..5900)
DNA (984bp) protein (328aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 7 items

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