ggKbase home page

PLM1_100_coex_sep16_scaffold_1516

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1516_1
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..139
DNA (138bp) protein (46aa)
phosphatidylinositol 3- and 4-kinase Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000375C506
SPG23_c17, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27539.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_1516_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(184..429)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1516_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(554..1447)
DNA (894bp) protein (298aa)
Membrane protein-like protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVM0_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_1516_4
unknown

Not on your lists

comp(1451..1543)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1516_5
unknown

Not on your lists

comp(1557..1661)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1516_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1675..1869)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QHY2_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90664.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM1_100_coex_sep16_scaffold_1516_7
unknown

Not on your lists

comp(1859..2020)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1516_8
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2040..3680)
DNA (1641bp) protein (547aa)
Peptidase S41 Tax=Ralstonia pickettii DTP0602 RepID=U3QRF5_RALPI
Cytochrome C oxidase {ECO:0000313|EMBL:EYS86809.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
peptidase S41
PLM1_100_coex_sep16_scaffold_1516_9
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3677..5062)
DNA (1386bp) protein (462aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QN15_RALPI
Cytochrome oxidase {ECO:0000313|EMBL:EYS86810.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_1516_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5067..5903)
DNA (837bp) protein (279aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEB0_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27056.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_100_coex_sep16_scaffold_1516_11
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5908..6066)
DNA (159bp) protein (53aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG41_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM1_100_coex_sep16_scaffold_1516_12
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6063..6515)
DNA (453bp) protein (151aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA9_ANADF
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM1_100_coex_sep16_scaffold_1516_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(6515..7672)
DNA (1158bp) protein (386aa)
Metallophosphoesterase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG40_9BACT
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:CBE68721.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM1_100_coex_sep16_scaffold_1516_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8030..8755)
DNA (726bp) protein (242aa)
Putative lipoprotein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA7_ANADF
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABS27053.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_100_coex_sep16_scaffold_1516_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8837..9670)
DNA (834bp) protein (278aa)
Putative transmembrane regulator PrtR Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UB62_MYXSD
putative transmembrane regulator PrtR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1516_16
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(9657..10256)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EHR5_CHLL2
RNA polymerase sigma factor RpoE
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
PLM1_100_coex_sep16_scaffold_1516_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10309..11376)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036682F8
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48437.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_1516_18
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11486..12193)
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Sphingobium quisquiliarum P25 RepID=T0HRS4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB00249.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
Displaying 18 items

View Taxonomy