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PLM1_100_coex_sep16_scaffold_1809

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1809_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..326
DNA (324bp) protein (108aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1809_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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343..1647
DNA (1305bp) protein (435aa)
Integral membrane sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1809_3
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1607..3055)
DNA (1449bp) protein (483aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WR9_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU64929.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_1809_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3060..3830
DNA (771bp) protein (257aa)
Enoyl-CoA hydratase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI9_RHOCS
enoyl-CoA hydratase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1809_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3844..5001
DNA (1158bp) protein (386aa)
id=3014946 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1809_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5074..5262)
DNA (189bp) protein (63aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1809_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5330..5899
DNA (570bp) protein (190aa)
HD phosphohydrolase Tax=Cupriavidus basilensis OR16 RepID=H1SH55_9BURK
HD phosphohydrolase {ECO:0000313|EMBL:EHP38168.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_1809_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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5896..6378
DNA (483bp) protein (161aa)
Thioesterase superfamily Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMN8_9BRAD
thioesterase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1809_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6477..7403)
DNA (927bp) protein (309aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1809_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7400..8212)
DNA (813bp) protein (271aa)
Short chain dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1809_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8481..8927
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Sphingomonas sp. MM-1 RepID=M4S3R8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49119.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
PLM1_100_coex_sep16_scaffold_1809_12
unknown

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8933..9067
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1809_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9086..11644
DNA (2559bp) protein (853aa)
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2)
Putative Peptidase M1, membrane alanine aminopeptidase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1809_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11794..12147)
DNA (354bp) protein (118aa)
id=3877521 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1809_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12257..13108
DNA (852bp) protein (284aa)
oxidoreductase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
oxidoreductase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1809_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13317..13817)
DNA (501bp) protein (167aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
MFS transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1809_17
unknown

Not on your lists

13902..14024
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 17 items

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