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PLM1_100_coex_sep16_scaffold_3398

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_3398_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(59..1015)
DNA (957bp) protein (319aa)
Hypothetical membrane protein bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_3398_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1119..2255)
DNA (1137bp) protein (379aa)
3'-5' exonuclease bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3'-5' exonuclease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_3398_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2320..3087
DNA (768bp) protein (256aa)
putative short chain dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_3398_4
unknown

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3102..3353
DNA (252bp) protein (84aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_3398_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3343..3729)
DNA (387bp) protein (129aa)
Response regulator receiver bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS sensor protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_3398_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3837..3959)
DNA (123bp) protein (41aa)
Two component transcriptional regulator, LuxR family bin=GWC2_Methylomirabilis_70_16 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LuxR family DNA-binding response regulator
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 6 items

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