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PLM1_100_coex_sep16_scaffold_356

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_356_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..895)
DNA (894bp) protein (298aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
threonine aldolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(906..1667)
DNA (762bp) protein (254aa)
hypothetical protein; K05807 putative lipoprotein bin=bin7_NC10_sister species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
competence lipoprotein ComL
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_356_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1771..3018
DNA (1248bp) protein (416aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3166..4419
DNA (1254bp) protein (418aa)
Secretion protein HlyD family protein bin=GWC2_Methylomirabilis_70_24 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
secretion protein HlyD family protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_356_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4449..5408)
DNA (960bp) protein (320aa)
Glyoxylate reductase (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding bin=GWC2_Methylomirabilis_70_24 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_356_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5405..6031)
DNA (627bp) protein (209aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6038..7012)
DNA (975bp) protein (325aa)
NAD-dependent epimerase/dehydratase bin=GWF2_Methylomirabilis_70_14 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7069..7779
DNA (711bp) protein (237aa)
GCN5-related N-acetyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D877_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EDY17431.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GCN5-related N-acetyltransferase
PLM1_100_coex_sep16_scaffold_356_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7829..8824
DNA (996bp) protein (332aa)
D-3-phosphoglycerate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-3-phosphoglycerate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8833..9621
DNA (789bp) protein (263aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9655..10338
DNA (684bp) protein (228aa)
TIGR00370 family protein bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative regulatory protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_356_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10335..11279
DNA (945bp) protein (315aa)
Allophanate hydrolase subunit 2 bin=GWF2_Methylomirabilis_70_14 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative regulatory protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_356_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

11299..12624
DNA (1326bp) protein (442aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
class III aminotransferase
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_356_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12642..13430
DNA (789bp) protein (263aa)
Lactam utilization-like protein (lamB); K07160 UPF0271 protein bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Lactam utilization-like protein (lamB)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13494..13676
DNA (183bp) protein (61aa)
Aminomethyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycine cleavage system protein T
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_356_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13722..13907
DNA (186bp) protein (62aa)
Aminomethyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Aminomethyltransferase (glycine cleavage system T protein)
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 16 items

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