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PLM1_100_coex_sep16_scaffold_496

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_496_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(68..1213)
DNA (1146bp) protein (382aa)
acetamidase/formamidase bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acetamidase/formamidase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_496_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1326..2477
DNA (1152bp) protein (384aa)
acyl-CoA dehydrogenase, short-chain specific (EC:1.3.99.2) bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_496_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2559..3281
DNA (723bp) protein (241aa)
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phophonate C-P lyase system transcriptional regulator PhnF, GntR family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_496_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3286..6897
DNA (3612bp) protein (1204aa)
5-oxoprolinase (ATP-hydrolyzing) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
N-methylhydantoinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_496_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6986..8146
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain protein bin=GWF2_Methylomirabilis_70_14 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_496_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8143..8814
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPY3_ROSS1
HAD family hydrolase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM1_100_coex_sep16_scaffold_496_7
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8814..9377
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE66_GEMAT
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM1_100_coex_sep16_scaffold_496_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9691..10479
DNA (789bp) protein (263aa)
Propanoyl-CoA C-acyltransferase bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetyl-CoA acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_496_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10476..11438
DNA (963bp) protein (321aa)
3-hydroxyacyl-CoA dehydrogenase family protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyacyl-CoA dehydrogenase family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_496_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11435..12832
DNA (1398bp) protein (466aa)
S-adenosylhomocysteine deaminase bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative hydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_496_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

12829..13260
DNA (432bp) protein (144aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative nucleic-acid-binding protein containing a Zn-ribbon
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_496_12
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13230..13709
DNA (480bp) protein (160aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI000378D64B
phosphodiesterase
Tax=RBG_16_Desulfobacca_60_12_curated
PLM1_100_coex_sep16_scaffold_496_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13799..14176
DNA (378bp) protein (126aa)
Cobalamin B12-binding domain protein bin=GWA2_Methylomirabilis_73_35 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamin B12-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_496_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14217..15812
DNA (1596bp) protein (532aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] bin=bin7_NC10_sister species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_496_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15806..16498
DNA (693bp) protein (231aa)
id=4221745 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_496_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16527..18800
DNA (2274bp) protein (758aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4)
Xanthine dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_496_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18797..19990
DNA (1194bp) protein (398aa)
Formyl-CoA transferase bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_496_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19987..21024
DNA (1038bp) protein (346aa)
NAD-dependent glycerol-3-phosphate dehydrogenase-like protein bin=GWA2_Methylomirabilis_73_35 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD/NADP octopine/nopaline dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_496_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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21094..21567
DNA (474bp) protein (158aa)
4-vinyl reductase 4VR bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 19 items

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