ggKbase home page

PLM1_100_coex_sep16_scaffold_739

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_739_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
Enoyl-CoA hydratase bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_739_2
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(429..1811)
DNA (1383bp) protein (461aa)
beta-lactamase class C penicillin binding protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
beta-lactamase class C penicillin binding protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM1_100_coex_sep16_scaffold_739_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1808..2044)
DNA (237bp) protein (79aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_739_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2055..2534)
DNA (480bp) protein (160aa)
Putative uncharacterized protein bin=GWA2_Deltaproteo_65_63 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM1_100_coex_sep16_scaffold_739_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2636..3508
DNA (873bp) protein (291aa)
xthA; exodeoxyribonuclease III (EC:3.1.11.2) bin=bin8_Chloro species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
xthA; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:AKF09296.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PLM1_100_coex_sep16_scaffold_739_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3570..4532
DNA (963bp) protein (321aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gsiC; glutathione transport system permease GsiC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_739_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4529..5377
DNA (849bp) protein (283aa)
Putative peptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_739_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5389..7011
DNA (1623bp) protein (541aa)
Putative periplasmic dipeptide transport substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic dipeptide transport substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_739_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7029..7676)
DNA (648bp) protein (216aa)
hypothetical protein bin=bin7_NC10_sister species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_739_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7677..9239)
DNA (1563bp) protein (521aa)
Molybdopterin oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin oxidoreductase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 10 items

View Taxonomy