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PLM1_100_coex_sep16_scaffold_2006

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2006_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1..1179)
DNA (1179bp) protein (393aa)
leuC; 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2006_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1300..2031
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XKN7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33109.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM1_100_coex_sep16_scaffold_2006_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2035..2403
DNA (369bp) protein (123aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfurococcus fermentans genus=Desulfurococcus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2006_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2605..3639
DNA (1035bp) protein (345aa)
Extracellular solute-binding protein family 1 bin=GWF2_Methylomirabilis_70_14 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2006_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3636..4424
DNA (789bp) protein (263aa)
ABC-type spermidine/putrescine transport system, permease component I bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2006_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4421..5197
DNA (777bp) protein (259aa)
Binding--dependent transport system inner membrane component family protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2006_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5209..6246
DNA (1038bp) protein (346aa)
Sulfate/thiosulfate import ATP-binding protein CysA 2 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. Mg1 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
spermidine/putrescine ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2006_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(6256..6558)
DNA (303bp) protein (101aa)
dao:Desac_0095 guanylate cyclase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
guanylate cyclase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Displaying 8 items

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