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PLM1_100_coex_sep16_scaffold_2050

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2050_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1..444)
DNA (444bp) protein (148aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2050_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(495..1904)
DNA (1410bp) protein (470aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
amidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2050_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1946..3157
DNA (1212bp) protein (404aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Zea mays genus=Zea taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2050_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3142..4368)
DNA (1227bp) protein (409aa)
cyclic nucleotide-binding protein bin=bin7_NC10_sister species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
peptidase M50
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2050_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4457..4957)
DNA (501bp) protein (167aa)
Transcriptional regulator, Crp/Fnr family bin=GWF2_Methylomirabilis_70_14 species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Crp/FNR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2050_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4974..5156)
DNA (183bp) protein (61aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2050_7
unknown

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comp(5153..5461)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_2050_8
unknown

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5569..5943
DNA (375bp) protein (125aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_2050_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6011..6721
DNA (711bp) protein (237aa)
Thermonuclease bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
micrococcal nuclease-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2050_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6728..7726)
DNA (999bp) protein (333aa)
Amino acid permease-associated region bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid permease-associated protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 10 items

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