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PLM1_100_coex_sep16_scaffold_2287

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2287_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(267..401)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX3_CHLTF
50S ribosomal protein L34
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2287_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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854..1819
DNA (966bp) protein (322aa)
dnaA; chromosomal replication initiator protein dnaA bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dnaA; chromosomal replication initiator protein dnaA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2287_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1985..3079
DNA (1095bp) protein (365aa)
DNA polymerase III subunit beta bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA polymerase III subunit beta
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2287_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3116..4165
DNA (1050bp) protein (350aa)
DNA replication and repair protein RecF bin=GWC2_Methylomirabilis_70_16 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
recF protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2287_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4162..5994
DNA (1833bp) protein (611aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2287_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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5991..6260
DNA (270bp) protein (90aa)
DNA gyrase subunit B bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA gyrase, B subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2287_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6313..8751
DNA (2439bp) protein (813aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2287_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8759..10045
DNA (1287bp) protein (429aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase bin=GWA2_Methylomirabilis_73_35 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2287_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10132..10422
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ILI7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83504.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
Displaying 9 items

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