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PLM1_100_coex_sep16_scaffold_5182

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_5182_1
unknown

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comp(1..207)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_5182_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(212..640)
DNA (429bp) protein (143aa)
tolR; protein TolR; K03560 biopolymer transport protein TolR bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
tolR; protein TolR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_5182_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(630..1361)
DNA (732bp) protein (244aa)
tolQ protein; K03562 biopolymer transport protein TolQ bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
MotA/TolQ/ExbB proton channel
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_5182_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1460..2215
DNA (756bp) protein (252aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_5182_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2212..2997
DNA (786bp) protein (262aa)
Beta-lactamase domain protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Beta-lactamase domain protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_5182_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3027..3719)
DNA (693bp) protein (231aa)
Putative 3-methyladenine DNA glycosylase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-3-methyladenine glycosylase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_5182_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3731..4894)
DNA (1164bp) protein (388aa)
thrC-like; threonine synthase (EC:4.2.3.1)
Threonine synthase ThrC bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_5182_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4891..5880)
DNA (990bp) protein (330aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative CgeB family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_5182_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5908..6231
DNA (324bp) protein (108aa)
Abc transporter permease protein bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitrate ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 9 items

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