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PLM1_100_coex_sep16_scaffold_1068

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1068_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..880)
DNA (879bp) protein (293aa)
Methyltransferase family protein Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W8J0_RHILT
Methyltransferase family protein {ECO:0000313|EMBL:EJC82106.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
C-methyltransferase
PLM1_100_coex_sep16_scaffold_1068_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(856..1938)
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI00037AF715
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EIJ34384.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
CDP-glucose 4,6-dehydratase
PLM1_100_coex_sep16_scaffold_1068_3
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(1942..2715)
DNA (774bp) protein (258aa)
Glucose-1-phosphate cytidylyltransferase Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QRH2_CYAP0
glucose-1-phosphate cytidylyltransferase
Tax=RBG_16_Planctomycetes_43_13_curated
PLM1_100_coex_sep16_scaffold_1068_4
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2760..3944
DNA (1185bp) protein (395aa)
Glycosyl transferase group 1 Tax=Geobacter sp. (strain M18) RepID=E8WKH6_GEOS8
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADW12465.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM1_100_coex_sep16_scaffold_1068_5
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

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comp(3922..4983)
DNA (1062bp) protein (354aa)
Glycosyl transferase family 2 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
family 2 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
PLM1_100_coex_sep16_scaffold_1068_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4980..5486)
DNA (507bp) protein (169aa)
MOSC domain containing protein bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1068_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(5488..5937)
DNA (450bp) protein (150aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MaoC domain-containing protein dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1068_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(5940..6059)
DNA (120bp) protein (40aa)
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1068_9
R_NC10_66_22, NC10, Bacteria

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comp(6050..6598)
DNA (549bp) protein (183aa)
ABC transporter, ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_1068_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(6585..7376)
DNA (792bp) protein (264aa)
ABC transporter related bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1068_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7373..8323)
DNA (951bp) protein (317aa)
Inner-membrane translocator bin=GWA2_Methylomirabilis_73_35 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1068_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8332..8544)
DNA (213bp) protein (71aa)
Inner-membrane translocator bin=GWA2_Methylomirabilis_73_35 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1068_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8541..9512)
DNA (972bp) protein (324aa)
Inner-membrane translocator bin=GWA2_Methylomirabilis_73_35 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1068_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9651..10853)
DNA (1203bp) protein (401aa)
Extracellular ligand-binding receptor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative branched-chain amino acid ABC transporter substrate binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1068_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10898..11548)
DNA (651bp) protein (217aa)
Thiamine-phosphate synthase bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiamine-phosphate pyrophosphorylase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1068_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11545..12888)
DNA (1344bp) protein (448aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] bin=bin7_NC10_sister species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase, biotin carboxylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1068_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12899..14164)
DNA (1266bp) protein (422aa)
Tetratricopeptide TPR_2 repeat protein bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TPR repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1068_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14175..14651)
DNA (477bp) protein (159aa)
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1068_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14651..15220)
DNA (570bp) protein (190aa)
Elongation factor P bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation elongation factor P
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1068_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15227..15685)
DNA (459bp) protein (153aa)
hypothetical protein bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 20 items

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