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PLM1_100_coex_sep16_scaffold_1275

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1275_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1..372)
DNA (372bp) protein (124aa)
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
AroB; 3-dehydroquinate synthetase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1275_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(469..2700)
DNA (2232bp) protein (744aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1275_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2701..3201)
DNA (501bp) protein (167aa)
Uncharacterized protein bin=bin7_NC10_sister species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1275_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3198..3866)
DNA (669bp) protein (223aa)
Pilus assembly protein PilO bin=GWF2_Methylomirabilis_70_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type IV pilus biogenesis protein PilO
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1275_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3868..4425)
DNA (558bp) protein (186aa)
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
fimbrial assembly family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1275_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4422..5483)
DNA (1062bp) protein (354aa)
Type IV pilus assembly protein PilM bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type IV pilus assembly protein PilM
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1275_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5632..6150)
DNA (519bp) protein (173aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1275_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6147..6590)
DNA (444bp) protein (148aa)
Putative Type IV pilus biogenesis protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Type IV pilus biogenesis protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1275_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6611..7360)
DNA (750bp) protein (250aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 4 prepilin-like proteins leader peptide processing enzyme
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 9 items

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