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PLM1_100_coex_sep16_scaffold_8406

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_8406_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..409)
DNA (408bp) protein (136aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpoD; RNA polymerase sigma factor rpod
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_8406_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1267..2205
DNA (939bp) protein (313aa)
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate decarboxylating) bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_8406_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2202..2924
DNA (723bp) protein (241aa)
glycosyl transferase family 2 protein (EC:2.4.1.-)
Glycosyl transferase, family 2 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_8406_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2921..3766
DNA (846bp) protein (282aa)
Aminotransferase class I and II bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aspartate aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 4 items

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