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PLM3_60_coex_sep16_scaffold_3867

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3867_1
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..387
DNA (387bp) protein (129aa)
Response regulator receiver protein Tax=Desulfovibrio fructosivorans JJ RepID=E1JS31_DESFR
Response regulator receiver protein
Tax=CG_Syntroph_02
PLM3_60_coex_sep16_scaffold_3867_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(384..1325)
DNA (942bp) protein (314aa)
Ribonuclease BN bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribonuclease BN family protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_3867_3
RBG_16_NC10_65_8_curated, NC10, Bacteria

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1408..3513
DNA (2106bp) protein (702aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034D8FED
transketolase
Tax=RBG_16_NC10_65_8_curated
PLM3_60_coex_sep16_scaffold_3867_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3510..4502)
DNA (993bp) protein (331aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI00036A4CFD
Uncharacterized protein {ECO:0000313|EMBL:ETW93114.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
5,10-methylenetetrahydromethanopterin reductase
PLM3_60_coex_sep16_scaffold_3867_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4492..4887)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Lewinella persica RepID=UPI000374AF37
Uncharacterized protein {ECO:0000313|EMBL:ETW93113.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
endoribonuclease L-PSP
PLM3_60_coex_sep16_scaffold_3867_6
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4884..6044)
DNA (1161bp) protein (387aa)
Extracellular ligand-binding receptor Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJA4_VEREI
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABM57711.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
PLM3_60_coex_sep16_scaffold_3867_7
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6108..6884
DNA (777bp) protein (259aa)
Candidate ABC type branched chain amino acid transport system, ATP-binding component Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXN6_RAMTT
branched chain amino acid ABC transporter ATP-binding protein
Candidate ABC type branched chain amino acid transport system, ATP-binding component {ECO:0000313|EMBL:AEG91839.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM3_60_coex_sep16_scaffold_3867_8
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6881..7600
DNA (720bp) protein (240aa)
Candidate ABC type branched chain amino acid transport system, ATP-binding component Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXN7_RAMTT
branched chain amino acid ABC transporter ATP-binding protein
Candidate ABC type branched chain amino acid transport system, ATP-binding component {ECO:0000313|EMBL:AEG91840.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM3_60_coex_sep16_scaffold_3867_9
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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7597..8508
DNA (912bp) protein (304aa)
High-affinity branched-chain amino acid transport system permease protein Tax=Rhizobium freirei PRF 81 RepID=N6V4Y7_9RHIZ
LivH, Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:KFZ90051.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_3867_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8505..9473
DNA (969bp) protein (323aa)
Inner-membrane translocator Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL2_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EHK59072.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
branched chain amino acid ABC transporter permease
PLM3_60_coex_sep16_scaffold_3867_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9397..9783)
DNA (387bp) protein (129aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI00037DBA8F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB44926.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_60_coex_sep16_scaffold_3867_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9776..10798)
DNA (1023bp) protein (341aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase Tax=Micromonospora sp. (strain L5) RepID=E8RXG7_MICSL
Uncharacterized protein {ECO:0000313|EMBL:ETW96400.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_60_coex_sep16_scaffold_3867_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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10965..12506
DNA (1542bp) protein (514aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
PLM3_60_coex_sep16_scaffold_3867_14
unknown

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comp(12980..13147)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3867_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(13544..13918)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI00036E5B2B
oligopeptide ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 15 items

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