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PLM3_60_coex_sep16_scaffold_13790

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_13790_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..1352)
DNA (1350bp) protein (450aa)
napA; nitrate reductase (EC:1.7.99.4)
Molybdopterin oxidoreductase bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13790_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1339..2103)
DNA (765bp) protein (255aa)
Nitrate ABC transporter, ATPase subunits C and D bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nrtD; nitrate/nitrite ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13790_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2100..2885)
DNA (786bp) protein (262aa)
ATPase components of various ABC-type transport systems bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrate ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13790_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2885..3655)
DNA (771bp) protein (257aa)
Nitrate/nitrite ABC transporter membrane protein bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrate ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13790_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3665..4855)
DNA (1191bp) protein (397aa)
Nitrate/nitrite ABC transporter substrate-binding protein bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrate/nitrite ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13790_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5135..5620)
DNA (486bp) protein (162aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_13790_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5848..6042)
DNA (195bp) protein (65aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_13790_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6054..6218)
DNA (165bp) protein (55aa)
Aminotransferase class-III bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_13790_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6215..7330)
DNA (1116bp) protein (372aa)
Aminotransferase bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
class III aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_13790_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7321..7743)
DNA (423bp) protein (141aa)
AIG2 family protein bin=GWA2_Methylomirabilis_73_35 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ytfP_[C]; protein of unknown function UPF0131
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_13790_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7727..7984)
DNA (258bp) protein (86aa)
peroxiredoxin (EC:1.11.1.15)
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen bin=bin7_NC10_sister species=Amycolatopsis nigrescens genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_13790_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8048..8185)
DNA (138bp) protein (46aa)
alkyl hydroperoxide reductase bin=bin7_NC10_sister species=Pyrobaculum calidifontis genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 12 items

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