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PLM3_60_coex_sep16_scaffold_5273

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5273_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..300
DNA (300bp) protein (100aa)
Major facilitator superfamily MFS_1 bin=GWA2_Methylomirabilis_73_35 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar phosphate permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_5273_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(378..2111)
DNA (1734bp) protein (578aa)
Putative gamma-glutamyltranspeptidase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gamma-glutamyltranspeptidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5273_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2204..2935
DNA (732bp) protein (244aa)
Peptidase C26 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase C26
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_5273_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2970..3833)
DNA (864bp) protein (288aa)
Metallo-beta-lactamase superfamily protein bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
blaB; metallo-beta-lactamase family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5273_5
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3841..4542)
DNA (702bp) protein (234aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUD2_9BRAD
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_5273_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4542..5297)
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter,ATP-binding component Tax=Azospirillum brasilense Sp245 RepID=G8AIU8_AZOBR
branched-chain amino acid ABC transporter,ATP-binding component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_60_coex_sep16_scaffold_5273_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5290..6237)
DNA (948bp) protein (316aa)
Branched-chain amino acid ABC transporter permease Tax=Oceanibaculum indicum P24 RepID=K2KG37_9PROT
branched-chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5273_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6237..6929)
DNA (693bp) protein (231aa)
ABC transporter permease Tax=Desulfospira joergensenii RepID=UPI0003B7AEE8
ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5273_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7032..8207)
DNA (1176bp) protein (392aa)
ABC transporter substrate-binding protein Tax=Bradyrhizobium elkanii RepID=UPI00030AB042
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5273_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8254..8682)
DNA (429bp) protein (143aa)
4-hydroxybenzoyl-CoA thioesterase bin=GWC2_Methylomirabilis_70_24 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
thioesterase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_5273_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8679..10205)
DNA (1527bp) protein (509aa)
Benzoate-CoA ligase family bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
benzoate-CoA ligase family
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_5273_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10265..12034)
DNA (1770bp) protein (590aa)
Putative TonB-dependent receptor Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI93_9BACT
TonB-dependent receptor
Putative TonB-dependent receptor {ECO:0000313|EMBL:CBE67243.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 12 items

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