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PLM3_60_coex_sep16_scaffold_4470

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4470_1
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1779..2750)
DNA (972bp) protein (324aa)
TIR domain protein Tax=Clostridiales bacterium BV3C26 RepID=U7UKK9_9FIRM
TIR domain protein {ECO:0000313|EMBL:ERT59424.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
TIR domain protein
PLM3_60_coex_sep16_scaffold_4470_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3060..3281)
DNA (222bp) protein (74aa)
Integrase family protein bin=GWC2_Methylomirabilis_70_16 species=Streptomyces flavogriseus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_4470_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3524..4939)
DNA (1416bp) protein (472aa)
Metal-dependent hydrolase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNA1_9BRAD
Amidohydrolase {ECO:0000313|EMBL:ETR76145.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
amidohydrolase 2
PLM3_60_coex_sep16_scaffold_4470_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5014..5784)
DNA (771bp) protein (257aa)
Bll0351 protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative Zn-dependent hydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_4470_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5929..6261
DNA (333bp) protein (111aa)
RSp1472; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Carboxymuconolactone decarboxylase bin=GWF2_Methylomirabilis_70_14 species=Yersinia bercovieri genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4470_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6258..7193
DNA (936bp) protein (312aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4470_7
R_NC10_66_22, NC10, Bacteria

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7190..8560
DNA (1371bp) protein (457aa)
MmgE/PrpD family protein bin=GWD2_Deltaproteobacteria_55_8 species=Oceanicola granulosus genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MmgE/PrpD family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_4470_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8557..9720)
DNA (1164bp) protein (388aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000371E0B3
Uncharacterized protein {ECO:0000313|EMBL:ETW92621.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4470_9
R_NC10_66_22, NC10, Bacteria

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9830..10849
DNA (1020bp) protein (340aa)
Candidate ABC type Fe3+ transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iron ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_4470_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

10846..12510
DNA (1665bp) protein (555aa)
Candidate ABC type Fe3+ transport system, permease component with duplicated domains bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iron ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_4470_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

12476..13591
DNA (1116bp) protein (372aa)
Candidate ABC transporter, ATP-binding component probably involved in an Fe3+ transport system bin=GWD2_Deltaproteobacteria_55_8 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
afuC; ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_4470_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13588..14124
DNA (537bp) protein (179aa)
formyl-CoA transferase (EC:2.8.3.16)
Succinyl-CoA:(R)-citramalate CoA-transferase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPE0_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:ETX04124.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Displaying 12 items

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