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PLM3_60_coex_sep16_scaffold_4674

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4674_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..416)
DNA (414bp) protein (138aa)
Aminotransferase class I and II bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aspartate aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4674_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(413..1135)
DNA (723bp) protein (241aa)
glycosyl transferase family 2 protein (EC:2.4.1.-)
Glycosyl transferase, family 2 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4674_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1132..2415)
DNA (1284bp) protein (428aa)
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate decarboxylating) bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4674_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2742..4238
DNA (1497bp) protein (499aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpoD; RNA polymerase sigma factor rpoD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4674_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4246..5229)
DNA (984bp) protein (328aa)
Esterase/lipase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK77_CHLTF
Esterase
Esterase {ECO:0000313|EMBL:AHG88336.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_60_coex_sep16_scaffold_4674_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5303..6541)
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037ABD21
Uncharacterized protein {ECO:0000313|EMBL:ETX08341.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
major facilitator superfamily permease
PLM3_60_coex_sep16_scaffold_4674_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6579..7088)
DNA (510bp) protein (170aa)
DinB family protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DinB family protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_4674_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7101..7316)
DNA (216bp) protein (72aa)
biotin/lipoyl attachment domain-containing protein bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
biotin/lipoyl attachment domain-containing protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_4674_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7344..8687)
DNA (1344bp) protein (448aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Carbamoyl-phosphate synthase L chain ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4674_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8687..9403)
DNA (717bp) protein (239aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_4674_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9491..10246)
DNA (756bp) protein (252aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_4674_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10291..11469)
DNA (1179bp) protein (393aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4674_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11476..11859)
DNA (384bp) protein (128aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4674_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11918..12121)
DNA (204bp) protein (68aa)
Metal dependent phosphohydrolase bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4674_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12148..12261)
DNA (114bp) protein (38aa)
Metal dependent phosphohydrolase bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4674_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12345..13028)
DNA (684bp) protein (228aa)
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4674_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13028..13411)
DNA (384bp) protein (128aa)
nifU; FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins bin=bin7_NC10_sister species=Oscillibacter sp. 1-3 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
FeS cluster assembly scaffold protein NifU
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_4674_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13408..14565)
DNA (1158bp) protein (386aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase bin=GWF2_Methylomirabilis_70_14 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4674_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14607..14930
DNA (324bp) protein (108aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_4674_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14941..15297
DNA (357bp) protein (119aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4674_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

15297..15521
DNA (225bp) protein (75aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 21 items

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