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PLM3_60_coex_sep16_scaffold_2003

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2003_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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40..804
DNA (765bp) protein (255aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (EC:1.1.1.-) bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_2003_2
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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809..2278
DNA (1470bp) protein (490aa)
Binding-protein-dependent transport systems inner membrane component Tax=Paenibacillus sp. P22 RepID=T2LPC6_9BACL
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDN41562.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
binding-protein-dependent transport system inner membrane protein
PLM3_60_coex_sep16_scaffold_2003_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2324..4747
DNA (2424bp) protein (808aa)
Sarcosine dehydrogenase, mitochondrial bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycine cleavage system T protein (aminomethyltransferase)
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_2003_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4755..5873
DNA (1119bp) protein (373aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNU9_MARHT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2003_5
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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5880..7166
DNA (1287bp) protein (429aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G425_CHLAD
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
PLM3_60_coex_sep16_scaffold_2003_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7184..7918
DNA (735bp) protein (245aa)
Short-chain dehydrogenase/reductase SDR bin=GWF2_Methylomirabilis_70_14 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2003_7
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7940..8089)
DNA (150bp) protein (50aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A726_GEMAT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
PLM3_60_coex_sep16_scaffold_2003_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8181..8714)
DNA (534bp) protein (178aa)
NUDIX hydrolase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2003_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8742..8972
DNA (231bp) protein (77aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2003_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8977..9207
DNA (231bp) protein (77aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_2003_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9219..10037
DNA (819bp) protein (273aa)
hypothetical protein AATC3_01647 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ubiquinone/menaquinone biosynthesis methyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_2003_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10034..10978
DNA (945bp) protein (315aa)
Putative aminopeptidase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative aminopeptidase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_2003_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10997..11239
DNA (243bp) protein (81aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_2003_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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11240..11506
DNA (267bp) protein (89aa)
Alkylhydroperoxidase like protein, AhpD family bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ynjA; protein YnjA
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 14 items

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