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PLM3_60_coex_sep16_scaffold_2604

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2604_1
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..298)
DNA (297bp) protein (99aa)
ABC transporter related protein Tax=alpha proteobacterium BAL199 RepID=A8TJV8_9PROT
ABC transporter-like protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
PLM3_60_coex_sep16_scaffold_2604_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(298..1089)
DNA (792bp) protein (264aa)
ABC transporter related Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZA8_RHOP2
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABD06452.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_60_coex_sep16_scaffold_2604_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1082..1705)
DNA (624bp) protein (208aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase bin=GWA2_Methylomirabilis_73_35 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_2604_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1775..2956
DNA (1182bp) protein (394aa)
Fosmidomycin resistance protein bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major Facilitator Superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2604_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3044..3364
DNA (321bp) protein (107aa)
hypothetical protein bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_2604_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3420..3782
DNA (363bp) protein (121aa)
HEPN domain protein bin=GWF2_Methylomirabilis_70_14 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HEPN domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_2604_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4160..4405
DNA (246bp) protein (82aa)
id=3864200 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_2604_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4415..5530
DNA (1116bp) protein (372aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAN5_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS25781.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_60_coex_sep16_scaffold_2604_9
unknown

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comp(5580..5768)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2604_10
unknown

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comp(5765..5965)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2604_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(6181..7185)
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALE23 RepID=UPI0003710765
sigma-54-dependent transcriptional response regulator
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_coex_sep16_scaffold_2604_12
unknown

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comp(7182..7394)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2604_13
unknown

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comp(7391..7579)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2604_14
unknown

Not on your lists

comp(7600..7803)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2604_15
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7994..9430)
DNA (1437bp) protein (479aa)
Biotin/lipoyl attachment domain-containing protein Tax=Calothrix sp. PCC 6303 RepID=K9UZT0_9CYAN
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AFZ00979.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
PLM3_60_coex_sep16_scaffold_2604_16
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9436..12573)
DNA (3138bp) protein (1046aa)
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RWI9_MYCRN
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain {ECO:0000313|EMBL:AEV73121.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain
PLM3_60_coex_sep16_scaffold_2604_17
unknown

Not on your lists

comp(12555..13625)
DNA (1071bp) protein (357aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2604_18
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(13667..13906)
DNA (240bp) protein (80aa)
HAD family hydrolase Tax=Amycolatopsis balhimycina RepID=UPI00037F23BB
HAD family hydrolase
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3_60_coex_sep16_scaffold_2604_19
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(13903..14217)
DNA (315bp) protein (105aa)
possible HAD superfamily hydrolase Tax=Verrucomicrobium spinosum RepID=UPI0001744B3D
HAD superfamily hydrolase
Tax=CG_Anaero_01
PLM3_60_coex_sep16_scaffold_2604_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14214..14600)
DNA (387bp) protein (129aa)
L-Alanine-DL-glutamate epimerase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative racemase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 20 items

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