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PLM3_60_coex_sep16_scaffold_7263

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7263_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..336
DNA (336bp) protein (112aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_7263_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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372..1076
DNA (705bp) protein (235aa)
Metal dependent phosphohydrolase with GAF sensor bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase with GAF sensor
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_7263_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(1086..1178)
DNA (93bp) protein (31aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_7263_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(1175..2110)
DNA (936bp) protein (312aa)
phosphoadenosine phosphosulfate reductase bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phosphoadenosine phosphosulfate reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_7263_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2107..2307)
DNA (201bp) protein (67aa)
Putative Thiamine biosynthesis protein ThiS bin=GWA2_Methylomirabilis_73_35 species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiamine biosynthesis protein ThiS
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_7263_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2344..2898
DNA (555bp) protein (185aa)
NUDIX hydrolase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_7263_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2903..4243
DNA (1341bp) protein (447aa)
acyltransferase domain-containing protein bin=bin7_NC10_sister species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyltransferase domain-containing protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_7263_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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4240..5052
DNA (813bp) protein (271aa)
hypothetical protein bin=bin7_NC10_sister species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_7263_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5102..6043
DNA (942bp) protein (314aa)
Luciferase-like Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRR2_RHOP2
luciferase-like protein
Luciferase-like {ECO:0000313|EMBL:ABD09098.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_60_coex_sep16_scaffold_7263_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6043..7080
DNA (1038bp) protein (346aa)
Luciferase-like Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRR3_RHOP2
luciferase-like protein
Luciferase-like {ECO:0000313|EMBL:ABD09097.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_60_coex_sep16_scaffold_7263_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7103..7540)
DNA (438bp) protein (146aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361EC01
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_60_coex_sep16_scaffold_7263_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7715..8497)
DNA (783bp) protein (261aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Conserved putative membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_7263_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(8494..9045)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor, sigma-70 family protein bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative RNA polymerase sigma factor, sigma-24-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_7263_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9171..10622
DNA (1452bp) protein (484aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XBE9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62834.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7263_15
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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10623..11000
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJ98_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV33956.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Displaying 15 items

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