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ACD51_14

Alias: ACD51_50969.15692.10

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_14_1
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(2..313)
DNA (312bp) protein (104aa)
Dihydrouridine synthase family protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH62_CLOAI (db=UNIREF evalue=1.0e-16 bit_score=89.0 identity=46.15 coverage=85.5769230769231)
transcription regulator-like protein yacF
Dus (db=HMMPfam db_id=PF01207 from=19 to=104 evalue=5.0e-21 interpro_id=IPR001269 interpro_description=tRNA-dihydrouridine synthase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
FMN-linked oxidoreductases (db=superfamily db_id=SSF51395 from=15 to=104 evalue=3.1e-19)
ACD51_14_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(369..1460)
DNA (1092bp) protein (364aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
seg (db=Seg db_id=seg from=352 to=363)
seg (db=Seg db_id=seg from=196 to=225)
seg (db=Seg db_id=seg from=157 to=175)
ACD51_14_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists


comp(1539..2087)
DNA (549bp) protein (183aa)
50S ribosomal protein L7/L12 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A2 (db=UNIREF evalue=3.0e-37 bit_score=157.0 identity=49.4 coverage=86.3387978142077)
coiled-coil (db=Coil db_id=coil from=8 to=29 evalue=NA)
seg (db=Seg db_id=seg from=37 to=59)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_14_4

Not on your lists

comp(2201..3121)
DNA (921bp) protein (307aa)
seg (db=Seg db_id=seg from=64 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
Uncharacterized protein {ECO:0000313|EMBL:EKD63584.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_14_5

Not on your lists

comp(3224..3385)
DNA (162bp) protein (54aa)
seg (db=Seg db_id=seg from=21 to=36)
coiled-coil (db=Coil db_id=coil from=21 to=42 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD63585.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_14_6

Not on your lists

comp(3429..3773)
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=4 to=17)
seg (db=Seg db_id=seg from=99 to=113)
seg (db=Seg db_id=seg from=49 to=60)
HesB-like domain (db=superfamily db_id=SSF89360 from=3 to=94 evalue=9.4e-21 interpro_id=IPR000361 interpro_description=FeS cluster biogenesis)
ACD51_14_7

Not on your lists

comp(3811..4266)
DNA (456bp) protein (152aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD63587.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_14_8

Not on your lists

4374..6191
DNA (1818bp) protein (606aa)
RND family efflux transporter MFP subunit
seg (db=Seg db_id=seg from=102 to=116)
seg (db=Seg db_id=seg from=126 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=28)
ACD51_14_9
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

6392..6856
DNA (465bp) protein (155aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
seg (db=Seg db_id=seg from=27 to=38)
NDP_KINASES (db=PatternScan db_id=PS00469 from=112 to=120 evalue=0.0 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
no description (db=HMMSmart db_id=SM00562 from=1 to=138 evalue=1.8e-68 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
ACD51_14_10

Not on your lists

comp(6864..7964)
DNA (1101bp) protein (367aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC35_9PLAN (db=UNIREF evalue=1.0e-107 bit_score=393.0 identity=53.35 coverage=93.1880108991826)
seg (db=Seg db_id=seg from=94 to=106)
ACD51_14_11
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(7927..8103)
DNA (177bp) protein (59aa)
DUF2082 (db=HMMPfam db_id=PF09855 from=12 to=58 evalue=2.4e-09 interpro_id=IPR018652 interpro_description=Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain)
DUF2082 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_14_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(8117..8566)
DNA (450bp) protein (150aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
transmembrane_regions 115..137 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_14_13

Not on your lists

comp(8590..8994)
DNA (405bp) protein (135aa)
seg (db=Seg db_id=seg from=93 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=118)
ACD51_14_14
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(9007..9354)
DNA (348bp) protein (116aa)
9007..9354 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD51_14_15

Not on your lists

comp(9351..10028)
DNA (678bp) protein (226aa)
hypothetical protein
Putative uncharacterized protein (Fragment) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L912_9DELT (db=UNIREF evalue=1.0e-35 bit_score=153.0 identity=39.47 coverage=81.4159292035398)
coiled-coil (db=Coil db_id=coil from=6 to=27 evalue=NA)
seg (db=Seg db_id=seg from=215 to=225)
ACD51_14_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10110..11438)
DNA (1329bp) protein (443aa)
seg (db=Seg db_id=seg from=146 to=158)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=211 to=356 evalue=1.1e-07)
ATP_GRASP (db=ProfileScan db_id=PS50975 from=150 to=364 evalue=10.241 interpro_id=IPR011761 interpro_description=ATP-grasp fold GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: ATP binding (GO:0005524))
seg 146..158 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ACD51_14_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11645..12001
DNA (357bp) protein (119aa)
PhnA protein
phnA: putative alkylphosphonate utilization (db=HMMTigr db_id=TIGR00686 from=3 to=118 evalue=1.9e-36 interpro_id=IPR004624 interpro_description=PhnA protein)
Prokaryotic SH3-related domain (db=superfamily db_id=SSF82057 from=43 to=118 evalue=6.6e-25)
PhnA (db=HMMPfam db_id=PF03831 from=49 to=103 evalue=6.3e-23 interpro_id=IPR013988 interpro_description=PhnA protein, C-terminal)
ACD51_14_18

Not on your lists

comp(12005..12181)
DNA (177bp) protein (59aa)
DUF2082 (db=HMMPfam db_id=PF09855 from=11 to=57 evalue=3.8e-09 interpro_id=IPR018652 interpro_description=Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain)
Uncharacterized protein {ECO:0000313|EMBL:EKD63598.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_14_19

Not on your lists

comp(12178..12654)
DNA (477bp) protein (159aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=150)
Uncharacterized protein {ECO:0000313|EMBL:EKD63599.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_14_20

Not on your lists

comp(12744..13091)
DNA (348bp) protein (116aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
ACD51_14_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13185..14252)
DNA (1068bp) protein (356aa)
myo-inositol-1-phosphate synthase
seg (db=Seg db_id=seg from=140 to=151)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=3 to=349 evalue=5.1e-67 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=2 to=349 evalue=1.9e-57)
ACD51_14_22

Not on your lists

comp(14430..14783)
DNA (354bp) protein (118aa)
14430..14783 - (rbs_motif=TAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD63602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_14_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(15162..15635)
DNA (474bp) protein (158aa)
15162..15635 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Displaying 23 items

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