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ACD65_21

Alias: ACD65_209641.4163.5

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_21_1
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(1..357)
DNA (357bp) protein (119aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
Protein of unknown function DUF3352 Tax=PER_GWF2_43_17
ACD65_21_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(380..1111)
DNA (732bp) protein (244aa)
seg (db=Seg db_id=seg from=6 to=20)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=6.0)
seg Tax=PER_GWF2_43_17
ACD65_21_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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1426..1563
DNA (138bp) protein (46aa)
1426..1563 + (rbs_motif=TAA rbs_spacer=14bp)
Tax=PER_GWF2_43_17
ACD65_21_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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1560..2423
DNA (864bp) protein (288aa)
glutaredoxin
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192)
seg (db=Seg db_id=seg from=241 to=254)
transmembrane_regions (db=TMHMM db_id=tmhmm from=204 to=223)
ACD65_21_5

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comp(2389..2592)
DNA (204bp) protein (68aa)
2389..2592 - (rbs_motif=TAA rbs_spacer=15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD48074.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_21_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(2873..3061)
DNA (189bp) protein (63aa)
seg (db=Seg db_id=seg from=21 to=62)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
seg Tax=PER_GWF2_43_17
ACD65_21_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

3188..3634
DNA (447bp) protein (149aa)
smpB; ssrA RNA (tmRNA)-binding protein
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=2 to=144 evalue=1.2e-54 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=4 to=126 evalue=5.1e-40 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=3 to=123 evalue=9.5e-36 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
ACD65_21_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

3641..4195
DNA (555bp) protein (185aa)
nadE; NAD+ synthase (EC:6.3.1.5)
seg (db=Seg db_id=seg from=6 to=17)
NAD_synthase (db=HMMPfam db_id=PF02540 from=5 to=184 evalue=1.7e-56 interpro_id=IPR022310 interpro_description=NAD/GMP synthase)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=1 to=184 evalue=4.1e-48 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Displaying 8 items

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