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ACD65_68

Alias: ACD65_154632.7920.6

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_68_1

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comp(1..906)
DNA (906bp) protein (302aa)
glycosyl transferase
seg (db=Seg db_id=seg from=86 to=101)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=14 to=302 evalue=5.8e-44)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=14 to=302 evalue=5.8e-44)
ACD65_68_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(1891..2982)
DNA (1092bp) protein (364aa)
group 1 glycosyl transferase
group 1 glycosyl transferase
UPI0001D58942 related cluster n=1 Tax=unknown RepID=UPI0001D58942 (db=UNIREF evalue=2.0e-106 bit_score=389.0 identity=52.78 coverage=97.8021978021978)
ACD65_68_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(3049..3384)
DNA (336bp) protein (112aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:KKT02848.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_68_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(3412..4113)
DNA (702bp) protein (234aa)
3412..4113 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT02849.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_68_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(4178..4543)
DNA (366bp) protein (122aa)
anti-sigma-factor antagonist
Anti-sigma-factor antagonist n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LRL6_CLOB8 (db=UNIREF evalue=7.0e-09 bit_score=62.8 identity=32.08 coverage=85.2459016393443)
Anti-sigma factor antagonist SpoIIaa (db=superfamily db_id=SSF52091 from=8 to=120 evalue=2.8e-16 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
no description (db=Gene3D db_id=G3DSA:3.30.750.24 from=10 to=116 evalue=1.2e-14 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
ACD65_68_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(4563..5132)
DNA (570bp) protein (190aa)
seg (db=Seg db_id=seg from=59 to=73)
Uncharacterized protein {ECO:0000313|EMBL:KKT02851.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_68_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(5182..5436)
DNA (255bp) protein (85aa)
tyrA; bifunctional chorismate mutase/prephenate dehydrogenase
CM_2 (db=HMMPfam db_id=PF01817 from=6 to=83 evalue=1.1e-17 interpro_id=IPR020822 interpro_description=Chorismate mutase, type II GO=Biological Process: chorismate metabolic process (GO:0046417))
Chorismate mutase II (db=superfamily db_id=SSF48600 from=2 to=82 evalue=2.8e-17 interpro_id=IPR020822 interpro_description=Chorismate mutase, type II GO=Biological Process: chorismate metabolic process (GO:0046417))
no description (db=HMMSmart db_id=SM00830 from=6 to=84 evalue=5.1e-15 interpro_id=IPR002701 interpro_description=Chorismate mutase GO=Biological Process: chorismate metabolic process (GO:0046417))
ACD65_68_8
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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5584..6273
DNA (690bp) protein (230aa)
30S ribosomal protein S2
rpsB_bact: ribosomal protein S2 (db=HMMTigr db_id=TIGR01011 from=9 to=229 evalue=2.5e-90 interpro_id=IPR005706 interpro_description=Ribosomal protein S2, bacteria/mitochondria/plastid GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal protein S2 (db=superfamily db_id=SSF52313 from=9 to=228 evalue=3.3e-79 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S2 (db=HMMPfam db_id=PF00318 from=12 to=227 evalue=1.5e-77 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD65_68_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

6294..6743
DNA (450bp) protein (150aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=54)
seg (db=Seg db_id=seg from=8 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=103)
Tic20 (db=HMMPfam db_id=PF09685 from=47 to=124 evalue=3.7e-09 interpro_id=IPR019109 interpro_description=Uncharacterised conserved protein ycf60 GO=Cellular Component: integral to membrane (GO:0016021))
ACD65_68_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

6767..7528
DNA (762bp) protein (254aa)
translation elongation factor Ts
Elongation factor Ts n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=EFTS_THICR (db=UNIREF evalue=1.0e-39 bit_score=166.0 identity=41.11 coverage=98.4251968503937)
seg (db=Seg db_id=seg from=172 to=191)
EF_TS_2 (db=PatternScan db_id=PS01127 from=74 to=84 evalue=0.0 interpro_id=IPR018101 interpro_description=Translation elongation factor Ts, conserved site GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ACD65_68_11
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

7529..7954
DNA (426bp) protein (142aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
DHBP_synthase (db=HMMPfam db_id=PF00926 from=3 to=142 evalue=1.2e-61 interpro_id=IPR000422 interpro_description=DHBP synthase RibB GO=Molecular Function: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (GO:0008686), Biological Process: riboflavin biosynthetic process (GO:0009231))
YrdC/RibB (db=superfamily db_id=SSF55821 from=1 to=142 evalue=1.2e-60 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
no description (db=Gene3D db_id=G3DSA:3.90.870.10 from=2 to=142 evalue=1.5e-55 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
Displaying 11 items

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