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S_scaffold_115

Alias: S_UNK_1739a

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_115_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

1..1293
DNA (1293bp) protein (431aa)
TRAP dicarboxylate transporter subunit DctM Tax=RBG_19FT_COMBO_JS1_35_14_curated
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit
S_scaffold_115_2
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1350..2651
DNA (1302bp) protein (434aa)
Uncharacterized protein {ECO:0000313|EMBL:KIL40466.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
hypothetical protein
Putative uncharacterized protein
S_scaffold_115_3
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

2675..3571
DNA (897bp) protein (299aa)
DMT(drug/metabolite transporter) superfamily permease Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
Putative integral membrane protein DUF6
S_scaffold_115_4
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3591..4979
DNA (1389bp) protein (463aa)
citG; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=766760 species="Bacteria; Firmi
Fumarate hydratase class II
S_scaffold_115_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4980..6710
DNA (1731bp) protein (577aa)
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_16_Deltaproteobacteria_49_23_curated
PHP domain-containing protein
PHP domain protein
S_scaffold_115_6
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

6676..7896
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFQ24745.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivora
major facilitator superfamily protein
Major facilitator superfamily MFS_1
S_scaffold_115_7
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7865..8782)
DNA (918bp) protein (306aa)
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ64553.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophi
Putative uncharacterized protein
S_scaffold_115_8
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

8896..11148
DNA (2253bp) protein (751aa)
pgm; phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2] Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
phosphoglucomutase, alpha-D-glucose phosphate-specific
Phosphoglucomutase, alpha-D-glucose phosphate-specific
S_scaffold_115_9
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

11400..13304
DNA (1905bp) protein (635aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=580340 species="Bacteria; Sy
DNA gyrase subunit B
DNA gyrase subunit B
S_scaffold_115_10
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13307..13804)
DNA (498bp) protein (166aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM22418.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain
Uncharacterized protein
S_scaffold_115_11
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13934..14998
DNA (1065bp) protein (355aa)
uxuA2; mannonate dehydratase 2 (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
Mannonate dehydratase
S_scaffold_115_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15153..15509)
DNA (357bp) protein (119aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
alkylhydroperoxidase
Alkylhydroperoxidase AhpD family core domain protein
S_scaffold_115_13
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(15540..15740)
DNA (201bp) protein (67aa)
4-oxalocrotonate tautomerase
Uncharacterized protein, 4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AFM20771.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source=
Uncharacterized protein, 4-oxalocrotonate tautomerase
S_scaffold_115_14
RLO_PLX_64_10, Bacteria

Not on your lists

comp(16036..16701)
DNA (666bp) protein (222aa)
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
Dimethylmenaquinone methyltransferase
S_scaffold_115_15
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

17185..18210
DNA (1026bp) protein (342aa)
TRAP dicarboxylate transporter subunit DctP Tax=GWC2_Spirochaetes_52_13_curated
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter subunit DctP
S_scaffold_115_16
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

18322..18849
DNA (528bp) protein (176aa)
TRAP-type C4-dicarboxylate transport system, small permease component Tax=GWC2_Spirochaetes_52_13_curated
Putative dicarboxylate transporter
Tripartite ATP-independent periplasmic transporter DctQ
S_scaffold_115_17
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

18846..20117
DNA (1272bp) protein (424aa)
TRAP dicarboxylate transporter subunit DctM Tax=GWC2_Spirochaetes_52_13_curated
siaT; Sialic acid TRAP transporter permease protein SiaT
TRAP dicarboxylate transporter subunit DctM
S_scaffold_115_18
Bacillus infantis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20719..21870)
DNA (1152bp) protein (384aa)
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGX06427.1}; TaxID=1367477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus infantis NRRL B-14911.;"
Putative alcohol dehydrogenase
S_scaffold_115_19
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

22050..22718
DNA (669bp) protein (223aa)
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACK41781.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strai
Transcriptional regulator, GntR family
S_scaffold_115_20
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22778..23767
DNA (990bp) protein (330aa)
Periplasmic substrate-binding protein, TRAP-type C4-dicarboxylate transporter {ECO:0000313|EMBL:EAS48335.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimo
TRAP dicarboxylate transporter subunit DctP
Periplasmic substrate-binding protein, TRAP-type C4-dicarboxylate transporter
S_scaffold_115_21
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23831..24298
DNA (468bp) protein (156aa)
TRAP-type C4-dicarboxylate transport system small permease component {ECO:0000313|EMBL:CDC68120.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibac
tripartite ATP-independent periplasmic transporter, DctQ component, putative
Putative small permease protein, TRAP-type C4-dicarboxylate transporter (DctQ subunit)
S_scaffold_115_22
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24311..25321
DNA (1011bp) protein (337aa)
ABC transporter permease {ECO:0000313|EMBL:KJS19792.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit
Displaying 22 items

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