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S_scaffold_218

Alias: S_Methanobacteria_50_514_20

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_218_1
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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300..749
DNA (450bp) protein (150aa)
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Meth
30S ribosomal protein S13
S_scaffold_218_2
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


766..1281
DNA (516bp) protein (172aa)
rps4p; 30S ribosomal protein S4 rbh
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Metha
30S ribosomal protein S4
S_scaffold_218_3
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


1299..1691
DNA (393bp) protein (131aa)
rps11p; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Meth
30S ribosomal protein S11
S_scaffold_218_4
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1693..2487
DNA (795bp) protein (265aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit D; EC=2.7.7.6;; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermo
DNA-directed RNA polymerase subunit D
S_scaffold_218_5
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


2491..2856
DNA (366bp) protein (122aa)
50S ribosomal protein L18
50S ribosomal protein L18e {ECO:0000255|HAMAP-Rule:MF_00329}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Met
50S ribosomal protein L18e
S_scaffold_218_6
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


2867..3289
DNA (423bp) protein (141aa)
bifunctional 50S ribosomal protein L13p/30S ribosomal protein S9p
Fused L13/S9 ribosomal protein; Includes:; 50S ribosomal protein L13; Includes:; 30S ribosomal protein S9; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobac
Fused L13/S9 ribosomal protein
S_scaffold_218_7
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


3305..3706
DNA (402bp) protein (134aa)
bifunctional 50S ribosomal protein L13p/30S ribosomal protein S9p
Fused L13/S9 ribosomal protein; Includes:; 50S ribosomal protein L13; Includes:; 30S ribosomal protein S9; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobac
Suspect SCG annotation. See neighboring gene [S_scaffold_218_6].
Fused L13/S9 ribosomal protein
S_scaffold_218_8
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


3765..3932
DNA (168bp) protein (56aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N; EC=2.7.7.6;; RPB10; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methan
DNA-directed RNA polymerase subunit N
S_scaffold_218_9
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

4110..4289
DNA (180bp) protein (60aa)
DNA-directed RNA polymerase subunit K; EC=2.7.7.6;; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermo
DNA-dependent RNA polymerase subunit K
DNA-directed RNA polymerase subunit K
S_scaffold_218_10
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

4341..5591
DNA (1251bp) protein (417aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase
S_scaffold_218_11
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


5619..6215
DNA (597bp) protein (199aa)
rps2P; 30S ribosomal protein S2
30S ribosomal protein S2; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter thermautotrophicus
30S ribosomal protein S2
S_scaffold_218_12
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

6226..7065
DNA (840bp) protein (280aa)
hypothetical protein rbh
MEMO1 family protein MTH_45 {ECO:0000255|HAMAP-Rule:MF_00055}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Me
MEMO1 family protein MTH_45
S_scaffold_218_13
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7076..7987
DNA (912bp) protein (304aa)
Mevalonate kinase {ECO:0000255|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000255|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000255|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000255|HAMAP-Rule:MF_00217};; TaxID=18
mevalonate kinase rbh
Mevalonate kinase
S_scaffold_218_14
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

8009..8809
DNA (801bp) protein (267aa)
Isopentenyl phosphate kinase; Short=IPK;; EC=2.7.4.26;; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanoth
hypothetical protein
Conserved protein
S_scaffold_218_15
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

8883..9932
DNA (1050bp) protein (350aa)
isopentenyl pyrophosphate isomerase (EC:5.3.3.2) rbh
Isopentenyl-diphosphate delta-isomerase {ECO:0000255|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000255|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000255|HAMAP-Rule:MF_00354};; Isopentenyl diphosphat
Isopentenyl-diphosphate delta-isomerase
S_scaffold_218_16
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

9934..11286
DNA (1353bp) protein (451aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=187420 species="Archaea; Euryarchaeota; Methano
hypothetical protein rbh
Conserved protein
S_scaffold_218_17
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11283..12260
DNA (978bp) protein (326aa)
Short chain isoprenyl diphosphate synthase; EC=2.5.1.-;; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanot
bifunctional short chain isoprenyl diphosphate synthase rbh
Short chain isoprenyl diphosphate synthase
S_scaffold_218_18
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

12270..13922
DNA (1653bp) protein (551aa)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17) rbh
Glutamate--tRNA ligase
S_scaffold_218_19
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

14112..15344
DNA (1233bp) protein (411aa)
LL-diaminopimelate aminotransferase; Short=DAP-AT;; Short=DAP-aminotransferase;; Short=LL-DAP-aminotransferase;; EC=2.6.1.83;; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobac
L,L-diaminopimelate aminotransferase rbh
LL-diaminopimelate aminotransferase
S_scaffold_218_20
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15405..15989)
DNA (585bp) protein (195aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAB84560.1}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothe
Putative uncharacterized protein
S_scaffold_218_21
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16084..17061)
DNA (978bp) protein (326aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL58140.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanother
Uncharacterized protein
S_scaffold_218_22
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17001..17969)
DNA (969bp) protein (323aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL58140.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanother
Uncharacterized protein
Displaying 22 items

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