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S_scaffold_13

Alias: S_Thermococci_40_79_2

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Displaying items 1-30 of 84 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_13_1
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3..554)
DNA (552bp) protein (184aa)
elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-1-alpha {ECO:0000255|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP
Elongation factor 1-alpha
S_scaffold_13_2
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(897..1430)
DNA (534bp) protein (178aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS90618.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_13_3
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1571..1756)
DNA (186bp) protein (62aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS90618.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_13_4
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1819..2412
DNA (594bp) protein (198aa)
ATPase
ATPase {ECO:0000313|EMBL:EHR78331.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DS
Predicted ATPase
S_scaffold_13_5
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(2409..3554)
DNA (1146bp) protein (382aa)
transaminase
Transaminase {ECO:0000313|EMBL:ACS90620.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 739 /
Transaminase
S_scaffold_13_6
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3892..4620
DNA (729bp) protein (243aa)
Peptidase C26 rbh
Peptidase C26 {ECO:0000313|EMBL:ACS90621.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 739 /
Peptidase C26
S_scaffold_13_7
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

4617..5990
DNA (1374bp) protein (458aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS90622.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_13_8
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

5992..6354
DNA (363bp) protein (121aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS90623.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_13_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6428..7819
DNA (1392bp) protein (464aa)
C4-dicarboxylate anaerobic carrier rbh
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:ACS90624.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibir
C4-dicarboxylate anaerobic carrier
S_scaffold_13_10
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7850..8914
DNA (1065bp) protein (355aa)
alanine racemase rbh
Alanine racemase, N-terminal {ECO:0000313|EMBL:ACS90625.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (
Alanine racemase, N-terminal
S_scaffold_13_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

8892..9944
DNA (1053bp) protein (351aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS90626.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_13_12
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


10083..10625
DNA (543bp) protein (181aa)
rpl10e; 50S ribosomal protein L10 rbh
50S ribosomal protein L10e {ECO:0000255|HAMAP-Rule:MF_00448}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
50S ribosomal protein L10e
S_scaffold_13_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10864..11847
DNA (984bp) protein (328aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS90628.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_13_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

12166..12978
DNA (813bp) protein (271aa)
uracil-DNA glycosylase rbh
Uracil-DNA glycosylase {ECO:0000313|EMBL:ACS90630.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain
Uracil-DNA glycosylase
S_scaffold_13_15
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

12988..13146
DNA (159bp) protein (53aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF69644.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY203
Uncharacterized protein
S_scaffold_13_16
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(13183..14415)
DNA (1233bp) protein (411aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1) rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01402}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01402};; Short=Phosphoglyceromutase {ECO:0000256|HA
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
S_scaffold_13_17
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

14509..15000
DNA (492bp) protein (164aa)
bis(5'-adenosyl)-triphosphatase rbh
Probable bis(5'-adenosyl)-triphosphatase, HIT family {ECO:0000313|EMBL:ACS90633.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="
Probable bis(5'-adenosyl)-triphosphatase, HIT family
S_scaffold_13_18
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(15047..16729)
DNA (1683bp) protein (561aa)
Na+/H+ antiporter, putative, NhaC family {ECO:0000313|EMBL:ACS90634.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
Na+/H+ antiporter, , NhaC family rbh
Na+/H+ antiporter, putative, NhaC family
S_scaffold_13_19
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(16966..17793)
DNA (828bp) protein (276aa)
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148) rbh
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX
S_scaffold_13_20
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

17885..18838
DNA (954bp) protein (318aa)
ornithine carbamoyltransferase (EC:2.1.3.3) rbh
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=604354 species="Archa
Ornithine carbamoyltransferase
S_scaffold_13_21
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18865..19842)
DNA (978bp) protein (326aa)
Hydrolase, HAD superfamily rbh
Hydrolase, HAD superfamily {ECO:0000313|EMBL:ACS90637.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (st
Hydrolase, HAD superfamily
S_scaffold_13_22
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(19898..20581)
DNA (684bp) protein (228aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS90638.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_13_23
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20650..24978)
DNA (4329bp) protein (1443aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=604354 species="Archaea; Euryar
DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit
S_scaffold_13_24
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(24990..26972)
DNA (1983bp) protein (661aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=604354 species="Archaea; Euryar
DNA polymerase II small subunit (EC:2.7.7.7) rbh
DNA polymerase II, small subunit
S_scaffold_13_25
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(26965..28227)
DNA (1263bp) protein (421aa)
cdc6; cell division control protein 6
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus si
ORC1-type DNA replication protein
S_scaffold_13_26
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(28520..29845)
DNA (1326bp) protein (442aa)
Tbp-interacting protein tip49 rbh
Tbp-interacting protein tip49 {ECO:0000313|EMBL:ACS90642.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
Tbp-interacting protein tip49
S_scaffold_13_27
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

30090..30404
DNA (315bp) protein (105aa)
H/ACA RNA-protein complex component Gar1
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:ACS90643.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
H/ACA RNA-protein complex component Gar1
S_scaffold_13_28
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

30513..31331
DNA (819bp) protein (273aa)
Transcription initiation factor IIB 2 rbh
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermo
Transcription initiation factor IIB
S_scaffold_13_29
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

31297..31863
DNA (567bp) protein (189aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;
Metallophosphoesterase, calcineurin superfamily rbh
Metallophosphoesterase, calcineurin superfamily
S_scaffold_13_30
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(31891..32094)
DNA (204bp) protein (68aa)
histone B
Archaeal histone B {ECO:0000313|EMBL:ACS90646.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM
Archaeal histone B
Displaying items 1-30 of 84 in total

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