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S_scaffold_42

Alias: S_Thermococci_40_79_7

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_42_1
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3..572)
DNA (570bp) protein (190aa)
TRAP-type transporter, fused permease components
TRAP-type transporter, fused permease components {ECO:0000313|EMBL:ACS89440.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Ther
TRAP-type transporter, fused permease components
S_scaffold_42_2
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(574..1023)
DNA (450bp) protein (150aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89441.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_42_3
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1020..2006)
DNA (987bp) protein (329aa)
TRAP-type transporter, periplasmic component
TRAP-type transporter, periplasmic component {ECO:0000313|EMBL:ACS89442.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermoco
TRAP-type transporter, periplasmic component
S_scaffold_42_4
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2283..3104
DNA (822bp) protein (274aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=604354 species="Archae
hypothetical protein rbh
D-tyrosyl-tRNA(Tyr) deacylase
S_scaffold_42_5
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3235..4356
DNA (1122bp) protein (374aa)
cell division protein FtsZ rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
Cell division protein FtsZ
S_scaffold_42_6
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

4478..4666
DNA (189bp) protein (63aa)
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=604354 species="Archaea; Euryarchaeot
Preprotein translocase subunit SecE
S_scaffold_42_7
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


4685..5143
DNA (459bp) protein (153aa)
nusG; transcription antitermination protein NusG
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
NusG transcription antitermination protein
S_scaffold_42_8
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


5157..5648
DNA (492bp) protein (164aa)
rpl11p; 50S ribosomal protein L17 rbh
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
50S ribosomal protein L11P
S_scaffold_42_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


5729..6379
DNA (651bp) protein (217aa)
rpl1P; 50S ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" s
50S ribosomal protein L1
S_scaffold_42_10
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


6385..7401
DNA (1017bp) protein (339aa)
rplP0; acidic ribosomal protein P0 rbh
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000255|HAMAP-Rule:MF_00280}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococ
Acidic ribosomal protein P0 homolog
S_scaffold_42_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7448..7762
DNA (315bp) protein (105aa)
rpl12p; 50S ribosomal protein L12
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
50S ribosomal protein L12
S_scaffold_42_12
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(7874..8344)
DNA (471bp) protein (157aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000255|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000255|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000255|HAMAP-Rule:MF_00146};; TaxID=604354 s
dcd; deoxycytidine triphosphate deaminase rbh
Probable deoxycytidine triphosphate deaminase
S_scaffold_42_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

9358..9606
DNA (249bp) protein (83aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000255|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00025};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Therm
DNA-directed RNA polymerase subunit H
S_scaffold_42_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

9624..12980
DNA (3357bp) protein (1119aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Th
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) rbh
DNA-directed RNA polymerase
S_scaffold_42_15
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

12977..15703
DNA (2727bp) protein (909aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Th
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase
S_scaffold_42_16
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

15703..16896
DNA (1194bp) protein (398aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; The
DNA-directed RNA polymerase subunit A''
S_scaffold_42_17
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


16911..17213
DNA (303bp) protein (101aa)
50S ribosomal protein L30
50S ribosomal protein L30e {ECO:0000255|HAMAP-Rule:MF_00481}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
50S ribosomal protein L30e
S_scaffold_42_18
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

17216..17653
DNA (438bp) protein (146aa)
transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="T
NusA like protein
S_scaffold_42_19
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


17664..18107
DNA (444bp) protein (148aa)
rps12P; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
30S ribosomal protein S12
S_scaffold_42_20
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


18113..18760
DNA (648bp) protein (216aa)
30S ribosomal protein S7 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (
30S ribosomal protein S7
S_scaffold_42_21
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18898..19317)
DNA (420bp) protein (140aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89462.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_42_22
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(19406..20524)
DNA (1119bp) protein (373aa)
Phosphodiesterase rbh
Phosphodiesterase {ECO:0000313|EMBL:ACS89463.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 7
Phosphodiesterase
S_scaffold_42_23
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20593..21432)
DNA (840bp) protein (280aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS89464.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_42_24
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(21506..22732)
DNA (1227bp) protein (409aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS89465.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_42_25
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(23015..24061)
DNA (1047bp) protein (349aa)
threonine synthase (EC:4.2.3.1) rbh
Threonine synthase {ECO:0000313|EMBL:ACS89466.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ACS89466.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
Threonine synthase
S_scaffold_42_26
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

24132..24965
DNA (834bp) protein (278aa)
Uridine phosphorylase (EC:2.4.2.3) rbh
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermoco
Uridine phosphorylase
S_scaffold_42_27
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(24976..25674)
DNA (699bp) protein (233aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS89468.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_42_28
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26131..26331
DNA (201bp) protein (67aa)
50S ribosomal protein L40
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
50S ribosomal protein L40e
S_scaffold_42_29
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(26334..26657)
DNA (324bp) protein (108aa)
Transcription regulator, PadR-like family
Transcription regulator, PadR-like family {ECO:0000313|EMBL:ACS89470.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcu
Transcription regulator, PadR-like family
S_scaffold_42_30
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26813..27112
DNA (300bp) protein (100aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89471.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
Displaying items 1-30 of 49 in total

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