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S_scaffold_85

Alias: S_Thermococci_40_79_10

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_85_1
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3..872)
DNA (870bp) protein (290aa)
sodium:solute symport protein
Putative sodium:solute symport protein {ECO:0000313|EMBL:ACS89707.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus s
Putative sodium:solute symport protein
S_scaffold_85_2
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1224..2387)
DNA (1164bp) protein (388aa)
Dye-linked L-proline dehydrogenase beta2 subunit (EC:1.5.3.1) rbh
Dye-linked L-proline dehydrogenase beta2 subunit {ECO:0000313|EMBL:ACS89705.1}; EC=1.5.3.1 {ECO:0000313|EMBL:ACS89705.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Th
Dye-linked L-proline dehydrogenase beta2 subunit
S_scaffold_85_3
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(2377..2658)
DNA (282bp) protein (94aa)
proline dehydrogenase
Proline dehydrogenase, delta subunit {ECO:0000313|EMBL:ACS89704.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sib
Proline dehydrogenase, delta subunit
S_scaffold_85_4
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(2655..3161)
DNA (507bp) protein (169aa)
Dye-linked L-proline dehydrogenase gamma2 subunit rbh
Dye-linked L-proline dehydrogenase gamma2 subunit {ECO:0000313|EMBL:ACS89703.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="The
Dye-linked L-proline dehydrogenase gamma2 subunit
S_scaffold_85_5
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3158..4591)
DNA (1434bp) protein (478aa)
Dye-L-proDH alpha (EC:1.5.3.1)
Dye-L-proDH alpha {ECO:0000313|EMBL:ACS89702.1}; EC=1.5.3.1 {ECO:0000313|EMBL:ACS89702.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
Dye-L-proDH alpha
S_scaffold_85_6
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4762..5901)
DNA (1140bp) protein (380aa)
Sarcosine oxidase, beta subunit (EC:1.5.3.1) rbh
Sarcosine oxidase, beta subunit {ECO:0000313|EMBL:ACS89701.1}; EC=1.5.3.1 {ECO:0000313|EMBL:ACS89701.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Th
Sarcosine oxidase, beta subunit
S_scaffold_85_7
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5906..7390)
DNA (1485bp) protein (495aa)
Sarcosine oxidase, alpha subunit (EC:1.5.3.1) rbh
Sarcosine oxidase, alpha subunit {ECO:0000313|EMBL:ACS89700.1}; EC=1.5.3.1 {ECO:0000313|EMBL:ACS89700.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; T
Sarcosine oxidase, alpha subunit
S_scaffold_85_8
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7578..8558
DNA (981bp) protein (327aa)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=604354 species="Archaea; Euryarchaeota; Th
Ornithine cyclodeaminase rbh
Ornithine cyclodeaminase
S_scaffold_85_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

8604..9599
DNA (996bp) protein (332aa)
proline racemase
Proline racemase {ECO:0000313|EMBL:ACS89698.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 73
Proline racemase
S_scaffold_85_10
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(9613..9729)
DNA (117bp) protein (39aa)
Uncharacterized protein {ECO:0000313|EMBL:AGT34189.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
S_scaffold_85_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(9730..11211)
DNA (1482bp) protein (494aa)
sodium:neurotransmitter symporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 739 /
Transporter
S_scaffold_85_12
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

11384..13855
DNA (2472bp) protein (824aa)
Pyruvate-formate lyase {ECO:0000313|EMBL:ACS89696.1}; EC=2.3.1.54 {ECO:0000313|EMBL:ACS89696.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococc
Pyruvate-formate lyase (EC:2.3.1.54) rbh
Pyruvate-formate lyase
S_scaffold_85_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

13906..14952
DNA (1047bp) protein (349aa)
proline racemase rbh
Proline racemase {ECO:0000313|EMBL:ACS89695.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 73
Proline racemase
S_scaffold_85_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

14964..15869
DNA (906bp) protein (302aa)
Pyruvate-formate lyase-activating enzyme (EC:1.97.1.4)
Pyruvate-formate lyase-activating enzyme {ECO:0000313|EMBL:ACS89694.1}; EC=1.97.1.4 {ECO:0000313|EMBL:ACS89694.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococ
Pyruvate-formate lyase-activating enzyme
S_scaffold_85_15
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(15870..17033)
DNA (1164bp) protein (388aa)
GTPase, GTP1/OBG family, containing TGS domain
Predicted GTPase, GTP1/OBG family, containing TGS domain {ECO:0000313|EMBL:ACS89693.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" sour
Predicted GTPase, GTP1/OBG family, containing TGS domain
S_scaffold_85_16
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

17154..17606
DNA (453bp) protein (151aa)
Transcription regulator, Lrp/AsnC family
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:ACS89692.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
Transcription regulator, Lrp/AsnC family
S_scaffold_85_17
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(17613..18176)
DNA (564bp) protein (188aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS89691.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_85_18
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18142..18861)
DNA (720bp) protein (240aa)
Hydrolase, HAD superfamily
Hydrolase, HAD superfamily {ECO:0000313|EMBL:ACS89690.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (st
Hydrolase, HAD superfamily
S_scaffold_85_19
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18897..19292)
DNA (396bp) protein (132aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89689.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_85_20
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(19301..20068)
DNA (768bp) protein (256aa)
NAD-dependent deacetylase (EC:3.5.1.-)
NAD-dependent protein deacylase {ECO:0000255|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000255|HAMAP-Rule:MF_01121}; TaxID=604354 specie
NAD-dependent protein deacylase
S_scaffold_85_21
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

20178..21455
DNA (1278bp) protein (426aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.- {ECO:0000256|HAM
Serine hydroxymethyltransferase
S_scaffold_85_22
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

21687..22457
DNA (771bp) protein (257aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
Pyrroline-5-carboxylate reductase
S_scaffold_85_23
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(22469..23737)
DNA (1269bp) protein (423aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
3-octaprenyl-4-hydroxybenzoate decarboxylyase {ECO:0000313|EMBL:ACS89685.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermoc
3-octaprenyl-4-hydroxybenzoate decarboxylyase
S_scaffold_85_24
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

23888..25258
DNA (1371bp) protein (457aa)
DNA/RNA repair helicase rbh
Predicted DNA/RNA repair helicase {ECO:0000313|EMBL:ACS89684.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiri
Predicted DNA/RNA repair helicase
S_scaffold_85_25
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(25245..26045)
DNA (801bp) protein (267aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) rbh
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A
S_scaffold_85_26
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(26374..28056)
DNA (1683bp) protein (561aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00284};
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit
S_scaffold_85_27
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(28063..29574)
DNA (1512bp) protein (504aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00282};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00282}
Phenylalanine--tRNA ligase alpha subunit
S_scaffold_85_28
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(29663..30694)
DNA (1032bp) protein (344aa)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
Probable L-threonine 3-dehydrogenase {ECO:0000313|EMBL:ACS89680.1}; EC=1.1.1.103 {ECO:0000313|EMBL:ACS89680.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcac
Probable L-threonine 3-dehydrogenase
Displaying 28 items

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