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S_scaffold_219

Alias: S_Thermococci_40_79_23

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_219_1
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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1..1527
DNA (1527bp) protein (509aa)
CDC48/VCP like protein, AAA superfamily
CDC48/VCP like protein, AAA superfamily {ECO:0000313|EMBL:ACS89587.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
CDC48/VCP like protein, AAA superfamily
S_scaffold_219_2
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1755..2255)
DNA (501bp) protein (167aa)
Intracellular protease 1 (EC:3.2.-.-) rbh
Intracellular protease 1 {ECO:0000313|EMBL:ACS89588.1}; EC=3.2.-.- {ECO:0000313|EMBL:ACS89588.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococ
Intracellular protease 1
S_scaffold_219_3
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2403..2819
DNA (417bp) protein (139aa)
RNA-binding protein, CRS1/YhbY family
Predicted RNA-binding protein, CRS1/YhbY family {ECO:0000313|EMBL:ACS89589.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Therm
Predicted RNA-binding protein, CRS1/YhbY family
S_scaffold_219_4
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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2824..3276
DNA (453bp) protein (151aa)
30S ribosomal protein S19
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis
30S ribosomal protein S19e
S_scaffold_219_5
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3351..3689
DNA (339bp) protein (113aa)
hypothetical protein
DNA-binding protein TSIB_0525 {ECO:0000255|HAMAP-Rule:MF_00026}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiri
DNA-binding protein TSIB_0525
S_scaffold_219_6
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3652..3966
DNA (315bp) protein (105aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89592.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
S_scaffold_219_7
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

4015..4914
DNA (900bp) protein (300aa)
tfb; transcription initiation factor IIB rbh
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermo
Transcription initiation factor IIB
S_scaffold_219_8
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4946..5968)
DNA (1023bp) protein (341aa)
flap endonuclease-1 (EC:3.-.-.-)
Flap endonuclease 1 {ECO:0000255|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000255|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1
S_scaffold_219_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6237..7625
DNA (1389bp) protein (463aa)
Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit alpha (EC:6.2.1.13) rbh
Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit alpha {ECO:0000313|EMBL:ACS89595.1}; EC=6.2.1.13 {ECO:0000313|EMBL:ACS89595.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermoc
Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit alpha
S_scaffold_219_10
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(7659..11303)
DNA (3645bp) protein (1215aa)
reverse gyrase (EC:5.99.1.3)
Reverse gyrase {ECO:0000256|HAMAP-Rule:MF_01125, ECO:0000256|RuleBase:RU004026}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="The
Reverse gyrase
S_scaffold_219_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11468..12007)
DNA (540bp) protein (180aa)
zinc finger SWIM domain protein rbh
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ACS89597.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricu
Zinc finger SWIM domain protein
S_scaffold_219_12
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

12127..13920
DNA (1794bp) protein (598aa)
Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Therm
translation initiation factor IF-2 rbh
Probable translation initiation factor IF-2
S_scaffold_219_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

13941..14552
DNA (612bp) protein (204aa)
hypothetical protein rbh
Predicted ATPase, PP-loop superfamily {ECO:0000313|EMBL:ACS89599.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus si
Predicted ATPase, PP-loop superfamily
S_scaffold_219_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14543..16264)
DNA (1722bp) protein (574aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:00
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17) rbh
Glutamate--tRNA ligase
S_scaffold_219_15
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

16363..16833
DNA (471bp) protein (157aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase
S_scaffold_219_16
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

16938..17378
DNA (441bp) protein (147aa)
peptidase U34, dipeptidase
Peptidase U34, dipeptidase {ECO:0000313|EMBL:ACS89602.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (st
Peptidase U34, dipeptidase
Displaying 16 items

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