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S_scaffold_136

Alias: S_Thermotoga_47_49_3

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_136_1
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(2..727)
DNA (726bp) protein (242aa)
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:ACB10050.1}; Flags: Precursor;; TaxID=126740 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. (strain RQ2).;
ABC-2 type transporter
S_scaffold_136_2
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(720..1313)
DNA (594bp) protein (198aa)
Thymidylate kinase {ECO:0000255|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000255|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000255|HAMAP-Rule:MF_00165}; TaxID=126740 species="Bacteria; Thermotogae; Thermot
thymidylate kinase rbh
Thymidylate kinase
S_scaffold_136_3
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(1897..2838)
DNA (942bp) protein (314aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=126740 species="Bacte
ornithine carbamoyltransferase rbh
Ornithine carbamoyltransferase
S_scaffold_136_4
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(2842..4035)
DNA (1194bp) protein (398aa)
adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase
S_scaffold_136_5
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(4041..5309)
DNA (1269bp) protein (423aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase
Adenylosuccinate lyase
S_scaffold_136_6
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(5751..7070)
DNA (1320bp) protein (440aa)
RNA methyltransferase, TrmA family
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ADA67741.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC
Uncharacterized RNA methyltransferase TM_1094
S_scaffold_136_7
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(7074..8714)
DNA (1641bp) protein (547aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1157947 species="Bacteria; The
Arginine--tRNA ligase
S_scaffold_136_8
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(8752..9582)
DNA (831bp) protein (277aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADA67743.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 /
Uncharacterized protein
S_scaffold_136_9
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(9575..10096)
DNA (522bp) protein (174aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADA67744.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 /
Uncharacterized protein
S_scaffold_136_10
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(10124..11386)
DNA (1263bp) protein (421aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase
S_scaffold_136_11
Thermotoga maritima, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(11383..12882)
DNA (1500bp) protein (500aa)
TRK system potassium uptake protein TrkH
Potassium uptake protein TrkH {ECO:0000313|EMBL:AGL50018.1}; TaxID=243274 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga maritima (strain ATCC 43589 /
Potassium uptake protein, TrkH family
S_scaffold_136_12
Thermotoga maritima, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(12889..13545)
DNA (657bp) protein (219aa)
potassium transporter TrkA
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:AGL50017.1}; TrkA K+ Channel protien TM1088B {ECO:0000313|PDB:3L4B}; TaxID=243274 species="Bacteria; Thermotogae; Thermotogales; Thermotogace
TrkA K+ Channel protien TM1088B
S_scaffold_136_13
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(13542..13973)
DNA (432bp) protein (144aa)
TrkA domain-containing protein
TrkA domain-containing protein {ECO:0000313|EMBL:KHC91607.1}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
TrkA K+ Channel protien TM1088A
S_scaffold_136_14
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(13993..14661)
DNA (669bp) protein (223aa)
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ACB10063.1}; TaxID=126740 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. (strain RQ2).;"
Rhomboid family protein
S_scaffold_136_15
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(14666..15514)
DNA (849bp) protein (283aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHC91609.1}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
Uncharacterized protein
S_scaffold_136_16
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


15575..17464
DNA (1890bp) protein (630aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
methionyl-tRNA synthetase
Methionine--tRNA ligase
S_scaffold_136_17
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


17478..19892
DNA (2415bp) protein (805aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1157947 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" sourc
DNA gyrase subunit A (EC:5.99.1.3) rbh
DNA gyrase subunit A
S_scaffold_136_18
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

19889..20263
DNA (375bp) protein (125aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADA67753.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 /
Protein archease
S_scaffold_136_19
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

20260..20853
DNA (594bp) protein (198aa)
transcriptional repressor, LexA family (EC:3.4.21.88) rbh
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=590168 species="Bacteria; Thermot
LexA repressor
S_scaffold_136_20
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

20865..20963
DNA (99bp) protein (33aa)
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
Putative anti-sigma factor antagonist TM_1081
S_scaffold_136_21
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

20971..21207
DNA (237bp) protein (79aa)
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
Putative anti-sigma factor antagonist TM_1081
S_scaffold_136_22
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

21204..21635
DNA (432bp) protein (144aa)
ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase {ECO:0000313|EMBL:ABQ47669.1}; EC=5.3.1.6 {ECO:0000313|EMBL:ABQ47669.1};; TaxID=390874 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source=
Ribose-5-phosphate isomerase
S_scaffold_136_23
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

21625..22419
DNA (795bp) protein (265aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
ribosomal L11 methyltransferase rbh
Ribosomal protein L11 methyltransferase
S_scaffold_136_24
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

22389..22901
DNA (513bp) protein (171aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB10072.1}; TaxID=126740 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. (strain RQ2).;"
Uncharacterized protein
S_scaffold_136_25
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

22898..22999
DNA (102bp) protein (34aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase
Displaying 25 items

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