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S_scaffold_243

Alias: S_Clostridia_62_19_6

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_243_1
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1..231)
DNA (231bp) protein (77aa)
Putative Tfp pilus assembly protein FimT {ECO:0000313|EMBL:CEO90021.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedi
N-terminal methylation protein
S_scaffold_243_2
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(268..1014)
DNA (747bp) protein (249aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43) rbh
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=555079
Type 4 prepilin-like proteins leader peptide-processing enzyme
S_scaffold_243_3
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1147..1740)
DNA (594bp) protein (198aa)
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF95018.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carb
N-terminal methylation
S_scaffold_243_4
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(1816..2403)
DNA (588bp) protein (196aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR79412.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
Uncharacterized protein
S_scaffold_243_5
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2494..3072)
DNA (579bp) protein (193aa)
N-terminal methylation
N-terminal methylation {ECO:0000313|EMBL:AEF95017.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivoran
N-terminal methylation
S_scaffold_243_6
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3239..3859)
DNA (621bp) protein (207aa)
N-terminal methylation
N-terminal methylation {ECO:0000313|EMBL:AEF95017.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivoran
N-terminal methylation
S_scaffold_243_7
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4135..4641)
DNA (507bp) protein (169aa)
N-terminal methylation
N-terminal methylation protein {ECO:0000313|EMBL:ABC19860.1}; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group
N-terminal methylation protein
S_scaffold_243_8
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5023..6243)
DNA (1221bp) protein (407aa)
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABC19861.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" sou
Type II secretion system protein
S_scaffold_243_9
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6343..7437)
DNA (1095bp) protein (365aa)
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ACA59481.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxvi
Twitching motility protein
S_scaffold_243_10
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7442..9136)
DNA (1695bp) protein (565aa)
type II secretion system protein E (GspE)
Type II secretion system protein E (GspE) {ECO:0000313|EMBL:ADL08659.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sed
Type II secretion system protein E
S_scaffold_243_11
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9126..10232)
DNA (1107bp) protein (369aa)
3-dehydroquinate synthase (EC:4.2.3.4) rbh
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=760568 species="Bacteria
3-dehydroquinate synthase
S_scaffold_243_12
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10207..10782)
DNA (576bp) protein (192aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia;
Shikimate kinase
S_scaffold_243_13
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10779..11945)
DNA (1167bp) protein (389aa)
chorismate synthase (EC:4.2.3.5) rbh
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:
Chorismate synthase
S_scaffold_243_14
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11952..12833)
DNA (882bp) protein (294aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
AroE; shikimate 5-dehydrogenase
Shikimate dehydrogenase
S_scaffold_243_15
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12841..13347)
DNA (507bp) protein (169aa)
HAD family phosphatase
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 {ECO:0000313|EMBL:ACA59498.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;"
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668
S_scaffold_243_16
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13350..14438)
DNA (1089bp) protein (363aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|SAAS:SAAS00049907}; EC=2.7.7.77 {ECO:0000256|SAAS:SAAS00049907};; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococca
putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB rbh
Molybdopterin-guanine dinucleotide biosynthesis protein B
S_scaffold_243_17
unknown

Not on your lists

14593..14739
DNA (147bp) protein (49aa)
S_scaffold_243_18
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14907..15617
DNA (711bp) protein (237aa)
FliA/WhiG family RNA polymerase sigma factor rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis auda
RNA polymerase sigma factor
S_scaffold_243_19
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15827..16381)
DNA (555bp) protein (185aa)
Nuclease (SNase domain protein) Tax=S_Thermoanaerobacterales_50_218
nuclease
Nuclease (SNase domain protein)
S_scaffold_243_20
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16395..16976)
DNA (582bp) protein (194aa)
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AGL01576.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfoto
Endonuclease/exonuclease/phosphatase
Displaying 20 items

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