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S_scaffold_250

Alias: S_Clostridia_62_19_7

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_250_1
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..291
DNA (291bp) protein (97aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase
S_scaffold_250_2
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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296..865
DNA (570bp) protein (190aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=477974 species="Ba
2'-5' RNA ligase
2'-5' RNA ligase
S_scaffold_250_3
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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942..1571
DNA (630bp) protein (210aa)
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ACA59035.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis auda
NADPH-dependent FMN reductase
S_scaffold_250_4
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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1634..2641
DNA (1008bp) protein (336aa)
deoxyguanosinetriphosphate triphosphohydrolase-like protein rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulfo
Deoxyguanosinetriphosphate triphosphohydrolase-like protein
S_scaffold_250_5
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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2735..4531
DNA (1797bp) protein (599aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=477974 species="Bacteria; Firmicutes;
DNA primase rbh
DNA primase
S_scaffold_250_6
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4718..5797
DNA (1080bp) protein (360aa)
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum
RNA polymerase sigma factor
S_scaffold_250_7
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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6557..7696
DNA (1140bp) protein (380aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACA59339.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviato
Uncharacterized protein
S_scaffold_250_8
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7702..9489
DNA (1788bp) protein (596aa)
Sensory box protein {ECO:0000313|EMBL:EGW39484.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
PAS/PAC sensor-containing diguanylate cyclase
Sensory box protein
S_scaffold_250_9
RIFOXYA2_FULL_WOR_1_51_19_curated, WOR-1, Bacteria

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9608..11047
DNA (1440bp) protein (480aa)
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_51_19_curated
Phosphodiesterase/alkaline phosphatase D
S_scaffold_250_10
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11142..12527
DNA (1386bp) protein (462aa)
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ACA58931.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.
Response regulator receiver modulated diguanylate cyclase
S_scaffold_250_11
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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12712..13935
DNA (1224bp) protein (408aa)
GTPase HflX Tax=S_Thermoanaerobacterales_50_218
GTP-binding proten HflX
GTPase HflX
S_scaffold_250_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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14040..15479
DNA (1440bp) protein (480aa)
transport protein Tax=CG_Dehalo_01
transport protein
Putative transport protein
S_scaffold_250_13
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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15562..16497
DNA (936bp) protein (312aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACX52868.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Amm
Putative uncharacterized protein
Displaying 13 items

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