ggKbase home page

S_scaffold_50

Alias: S_Synergistetes_54_25_3

Search features with annotation key words

Displaying items 1-30 of 52 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_50_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)
S_scaffold_50_2
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(40..2079)
DNA (2040bp) protein (680aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovi
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase
S_scaffold_50_3
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(2084..2428)
DNA (345bp) protein (115aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=584708 species="Bacteria; Synergistetes; Synergi
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Chemotaxis response regulator protein-glutamate methylesterase
S_scaffold_50_4
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(2605..3144)
DNA (540bp) protein (180aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=592015 species="Bacteria; Synergistetes; Synergi
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Chemotaxis response regulator protein-glutamate methylesterase
S_scaffold_50_5
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(3141..3791)
DNA (651bp) protein (217aa)
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EFQ23299.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 1
type IV pilus assembly PilZ
Type IV pilus assembly PilZ
S_scaffold_50_6
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(3793..4719)
DNA (927bp) protein (309aa)
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12
NifH/FrxC:cobyrinic acid a,c-diamide synthase
Site-determining protein
S_scaffold_50_7
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(4706..5866)
DNA (1161bp) protein (387aa)
GTP-binding signal recognition particle SRP54 G-domain-containing protein
GTP-binding signal recognition particle SRP54 G-domain protein {ECO:0000313|EMBL:ACZ19545.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibr
GTP-binding signal recognition particle SRP54 G-domain protein
S_scaffold_50_8
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(5870..7942)
DNA (2073bp) protein (691aa)
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EFQ23296.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivora
flagellar biosynthesis protein FlhA rbh
Flagellar biosynthesis protein FlhA
S_scaffold_50_9
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(7942..9054)
DNA (1113bp) protein (371aa)
flagellar biosynthetic protein FlhB
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:EFQ23295.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivora
Flagellar biosynthetic protein FlhB
S_scaffold_50_10
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9045..9821)
DNA (777bp) protein (259aa)
flagellar biosynthetic protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum m
UPI000265C839 related cluster
S_scaffold_50_11
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9818..10078)
DNA (261bp) protein (87aa)
flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:AFM20940.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mob
UPI000265C838 related cluster
S_scaffold_50_12
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(10094..10882)
DNA (789bp) protein (263aa)
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EFQ23292.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivora
flagellar biosynthetic protein FliP rbh
Flagellar biosynthetic protein FliP
S_scaffold_50_13
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(10872..11246)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:EFQ23291.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260
hypothetical protein
Putative uncharacterized protein
S_scaffold_50_14
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11275..11634)
DNA (360bp) protein (120aa)
response regulator receiver protein
Chemotaxis protein CheY {ECO:0000313|EMBL:EFD24414.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniforman
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
S_scaffold_50_15
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11664..12779)
DNA (1116bp) protein (372aa)
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EFQ23289.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivora
flagellar motor switch protein FliN
Flagellar motor switch protein FliN
S_scaffold_50_16
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12761..13783)
DNA (1023bp) protein (341aa)
flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:ACZ19554.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovi
Flagellar motor switch protein FliM
S_scaffold_50_17
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13798..14253)
DNA (456bp) protein (152aa)
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:EFD24417.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaeroba
flagellar basal body-associated protein
Flagellar basal body-associated protein FliL
S_scaffold_50_18
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(14275..14997)
DNA (723bp) protein (241aa)
flagellar motor protein
Flagellar motor protein {ECO:0000313|EMBL:AFM20933.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain
Flagellar motor protein
S_scaffold_50_19
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(15000..15794)
DNA (795bp) protein (265aa)
Flagellar motor component {ECO:0000313|EMBL:EHM09600.1}; Flags: Precursor;; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Ther
flagellar motor component rbh
MotA/TolQ/ExbB proton channel
S_scaffold_50_20
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(15840..16025)
DNA (186bp) protein (62aa)
Flagellar protein (FlbD) {ECO:0000313|EMBL:EFD24420.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniforma
flagellar FlbD family protein
Flagellar protein
S_scaffold_50_21
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(16038..17939)
DNA (1902bp) protein (634aa)
flagellar hook-basal body protein
Flagellar hook-basal body protein {ECO:0000313|EMBL:AFM20930.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobil
Flagellar hook-basal body protein
S_scaffold_50_22
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(17987..18391)
DNA (405bp) protein (135aa)
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:ACZ19560.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio
Flagellar hook capping protein
S_scaffold_50_23
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(18411..19871)
DNA (1461bp) protein (487aa)
Flagellar hook-length control protein {ECO:0000313|EMBL:EHM09596.1}; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaero
flagellar hook-length control protein
Flagellar hook-length control protein
S_scaffold_50_24
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(19890..20555)
DNA (666bp) protein (222aa)
MgtE intracellular region {ECO:0000313|EMBL:EFQ23278.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 122
hypothetical protein
MgtE intracellular region
S_scaffold_50_25
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(20559..21128)
DNA (570bp) protein (190aa)
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EFQ23277.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans
lytic transglycosylase
Lytic transglycosylase catalytic
S_scaffold_50_26
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(21125..21589)
DNA (465bp) protein (155aa)
Flagellar export protein FliJ {ECO:0000313|EMBL:EFQ23276.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM
Flagellar FliJ protein.
Flagellar export protein FliJ
S_scaffold_50_27
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(21652..22977)
DNA (1326bp) protein (442aa)
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:EFD24427.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EFD24427.1};; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistacea
type III secretion system ATPase, FliI/YscN (EC:3.6.3.15)
Flagellar protein export ATPase FliI
S_scaffold_50_28
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(22967..23800)
DNA (834bp) protein (278aa)
flagellar biosynthesis/type III secretory pathway protein
Flagellar assembly protein FliH {ECO:0000313|EMBL:EFD24428.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydroge
Putative flagellar assembly protein FliH
S_scaffold_50_29
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(23793..24806)
DNA (1014bp) protein (338aa)
flagellar motor switch protein FliG rbh
Flagellar motor switch protein FliG {ECO:0000313|EMBL:ACZ19567.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovi
Flagellar motor switch protein FliG
S_scaffold_50_30
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(24883..26439)
DNA (1557bp) protein (519aa)
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; Flags: Precursor;; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="The
flagellar M-ring protein FliF rbh
Flagellar M-ring protein
Displaying items 1-30 of 52 in total

View Taxonomy