ggKbase home page

S_scaffold_196

Alias: S_Synergistetes_54_25_24

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_196_1
unknown

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)
S_scaffold_196_2
unknown

Not on your lists

comp(241..432)
DNA (192bp) protein (64aa)
S_scaffold_196_3
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(429..707)
DNA (279bp) protein (93aa)
Putative uncharacterized protein Tax=S_Thermoanaerobacterales_50_218
hypothetical protein
Uncharacterized protein
S_scaffold_196_4
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1247..1735)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD40568.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
hypothetical protein
Uncharacterized protein
S_scaffold_196_5

Not on your lists

comp(1732..2103)
DNA (372bp) protein (124aa)
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39967.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
Putative uncharacterized protein
S_scaffold_196_6
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2541..2798
DNA (258bp) protein (86aa)
Toxin-antitoxin system, antitoxin component, AbrB famil {ECO:0000313|EMBL:CEO87958.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III
regulators of stationary/sporulation gene expression
Toxin-antitoxin system, antitoxin component, AbrB famil
S_scaffold_196_7
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(3056..4765)
DNA (1710bp) protein (570aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM21795.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain
Uncharacterized protein
S_scaffold_196_8
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(5133..5567)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Caldatribacterium californiense
hypothetical protein
Uncharacterized protein
S_scaffold_196_9
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(5531..6034)
DNA (504bp) protein (168aa)
DNA polymerase beta domain-containing protein Tax=Caldatribacterium californiense
nucleotidyltransferase domain-containing protein
Nucleotidyltransferase domain protein
S_scaffold_196_10
Alcanivorax pacificus W11-5, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6081..6470)
DNA (390bp) protein (130aa)
Uncharacterized protein
S_scaffold_196_11
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6695..8014)
DNA (1320bp) protein (440aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EFC90257.1}; EC=1.1.1.22 {ECO:0000313|EMBL:EFC90257.1};; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Det
udg; UDP-glucose 6-dehydrogenase
Nucleotide sugar dehydrogenase
S_scaffold_196_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8014..9171)
DNA (1158bp) protein (386aa)
UDP-glucuronate 4-epimerase (EC:5.1.3.6)
Putative NAD-binding domain 4 protein {ECO:0000313|EMBL:EEB76199.1}; UDP-glucose 4-epimerase {ECO:0000313|EMBL:KKC30203.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacteral
Putative NAD-binding domain 4 protein
S_scaffold_196_13
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9805..11250)
DNA (1446bp) protein (482aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase rbh
Argininosuccinate lyase
S_scaffold_196_14
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11231..12172)
DNA (942bp) protein (314aa)
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EFD24391.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hyd
exopolyphosphatase
Putative Ppx/GppA phosphatase
S_scaffold_196_15
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12769..13170)
DNA (402bp) protein (134aa)
RNA binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:ACZ19532.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio a
RNA binding S1 domain protein
S_scaffold_196_16
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13274..13498)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:EFD24394.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniforman
Putative uncharacterized protein
S_scaffold_196_17
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13885..14448)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:EFQ23308.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260
hypothetical protein
Putative uncharacterized protein
S_scaffold_196_18
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(14458..14757)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:EFD24396.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniforman
Putative uncharacterized protein
S_scaffold_196_19
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(14787..16376)
DNA (1590bp) protein (530aa)
Uncharacterized protein {ECO:0000313|EMBL:EFQ23306.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260
hypothetical protein rbh
Putative uncharacterized protein
S_scaffold_196_20
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(16393..17127)
DNA (735bp) protein (245aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM
RNA polymerase sigma 28 subunit FliA/WhiG
RNA polymerase sigma factor
S_scaffold_196_21
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(17134..18189)
DNA (1056bp) protein (352aa)
Fungal mating-type pheromone {ECO:0000313|EMBL:EFQ23304.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM
hypothetical protein
Fungal mating-type pheromone
S_scaffold_196_22
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(18204..18689)
DNA (486bp) protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergist
chemotaxis protein
Probable chemoreceptor glutamine deamidase CheD
S_scaffold_196_23
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(18692..19144)
DNA (453bp) protein (151aa)
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:EFQ23302.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivoran
MCP methylation inhibitor CheC
CheC, inhibitor of MCP methylation
Displaying 23 items

View Taxonomy