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S_scaffold_245

Alias: S_Synergistetes_54_25_27

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_245_1
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(36..1076)
DNA (1041bp) protein (347aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergi
Holliday junction DNA helicase RuvB
Holliday junction ATP-dependent DNA helicase RuvB
S_scaffold_245_2
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(1048..1683)
DNA (636bp) protein (212aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergi
Holliday junction DNA helicase RuvA
Holliday junction ATP-dependent DNA helicase RuvA
S_scaffold_245_3
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(1701..2171)
DNA (471bp) protein (157aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC
S_scaffold_245_4
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(2188..2943)
DNA (756bp) protein (252aa)
YebC/PmpR family DNA-binding regulatory protein rbh
Probable transcriptional regulatory protein Anamo_0702 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" so
Probable transcriptional regulatory protein Anamo_0702
S_scaffold_245_5
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(2966..3694)
DNA (729bp) protein (243aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=572547 species="
NAD+ synthetase
NH(3)-dependent NAD(+) synthetase
S_scaffold_245_6
Thermotoga sp. KOL6, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(3762..4418)
DNA (657bp) protein (219aa)
Putative uncharacterized protein
S_scaffold_245_7
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

4487..4894
DNA (408bp) protein (136aa)
CopG family transcriptional regulator
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculu
Putative nickel-responsive regulator
S_scaffold_245_8
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(5113..6060)
DNA (948bp) protein (316aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
ornithine carbamoyltransferase
Ornithine carbamoyltransferase
S_scaffold_245_9
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6094..6867)
DNA (774bp) protein (258aa)
agmatinase
Agmatinase {ECO:0000313|EMBL:AER66777.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / D
Agmatinase
S_scaffold_245_10
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6918..7808)
DNA (891bp) protein (297aa)
spermidine synthase
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=89
Spermidine synthase
S_scaffold_245_11
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(7813..8289)
DNA (477bp) protein (159aa)
Arginine decarboxylase, pyruvoyl-dependent {ECO:0000313|EMBL:EFD24869.1}; EC=4.1.1.19 {ECO:0000313|EMBL:EFD24869.1};; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergi
arginine decarboxylase
Probable pyruvoyl-dependent arginine decarboxylase
S_scaffold_245_12
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(8511..9620)
DNA (1110bp) protein (370aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1) rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
S_scaffold_245_13
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9590..10624)
DNA (1035bp) protein (345aa)
membrane-associated Zn-dependent protease rbh
Putative membrane-associated Zn-dependent protease {ECO:0000313|EMBL:AFM21409.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="An
Putative membrane-associated Zn-dependent protease
S_scaffold_245_14
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(10697..11536)
DNA (840bp) protein (280aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistac
phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase
S_scaffold_245_15
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11502..12212)
DNA (711bp) protein (237aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Amino
undecaprenyl diphosphate synthase rbh
Isoprenyl transferase
S_scaffold_245_16
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12196..12855)
DNA (660bp) protein (220aa)
uracil-DNA glycosylase, family 4
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:AFM21405.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile
Uracil-DNA glycosylase, family 4
S_scaffold_245_17
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12845..13696)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:EFQ23834.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260
hypothetical protein
Putative uncharacterized protein
S_scaffold_245_18
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13683..14798)
DNA (1116bp) protein (372aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol-phosphate aminotransferase rbh
Histidinol-phosphate aminotransferase
S_scaffold_245_19
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(14833..16113)
DNA (1281bp) protein (427aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine1-carboxyvinyltransferase
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
S_scaffold_245_20
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(16110..16808)
DNA (699bp) protein (233aa)
UDP-N-Acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EFQ23831.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EFQ23831.1};; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae
UDP-N-Acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase
Displaying 20 items

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