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S_scaffold_253

Alias: S_Synergistetes_54_25_30

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_253_1
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(3..872)
DNA (870bp) protein (290aa)
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EFD24292.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" so
transketolase central region
Putative transketolase
S_scaffold_253_2
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(940..2325)
DNA (1386bp) protein (462aa)
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:EHM09789.1}; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="The
3-oxoacyl-(acyl-carrier-protein) synthase III
3-oxoacyl-(Acyl-carrier-protein) synthase III
S_scaffold_253_3
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2322..2624)
DNA (303bp) protein (101aa)
glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.2)
Glycine reductase {ECO:0000313|EMBL:ACL48038.1}; EC=1.21.4.2 {ECO:0000313|EMBL:ACL48038.1};; TaxID=525146 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionacea
Glycine reductase
S_scaffold_253_4
unknown

Not on your lists

comp(2664..2792)
DNA (129bp) protein (43aa)
S_scaffold_253_5
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(2810..3517)
DNA (708bp) protein (236aa)
amino acid ABC transporter ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:AER67062.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirg
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
S_scaffold_253_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3514..5397)
DNA (1884bp) protein (628aa)
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) {ECO:0000313|EMBL:CDL55000.1}; TaxID=1432560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
branched subunit amino acid ABC transporter
Branched chain amino acid ABC superfamily ATP binding cassette transporter
S_scaffold_253_7
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(5417..6310)
DNA (894bp) protein (298aa)
livH; leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily Tax=Caldatribacterium saccharofermentans
amino acid ABC transporter permease
Amino acid/amide ABC transporter membrane protein 1, HAAT family
S_scaffold_253_8
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(6416..7549)
DNA (1134bp) protein (378aa)
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=Caldatribacterium californiense
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family
S_scaffold_253_9
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(7726..9087)
DNA (1362bp) protein (454aa)
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA
SNF family Na+-dependent transporter
Transporter
S_scaffold_253_10
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9251..10240)
DNA (990bp) protein (330aa)
hydrogenase maturation protein, carbamoyl dehydratase HypE
Hydrogenase maturation protein, carbamoyl dehydratase HypE {ECO:0000313|EMBL:AFM21050.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" so
Hydrogenase maturation protein, carbamoyl dehydratase HypE
S_scaffold_253_11
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(10228..11328)
DNA (1101bp) protein (367aa)
hydrogenase expression/formation protein HypD rbh
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:ADE57519.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminob
Hydrogenase expression/formation protein HypD
S_scaffold_253_12
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11312..11542)
DNA (231bp) protein (77aa)
hydrogenase maturation protein HypC
Hydrogenase maturation protein HypC {ECO:0000313|EMBL:AFM21048.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mob
Hydrogenase maturation protein HypC
S_scaffold_253_13
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11705..12487)
DNA (783bp) protein (261aa)
Putative metallophosphoesterase {ECO:0000313|EMBL:EFD24308.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydroge
metallophosphoesterase
Ser/Thr protein phosphatase family protein
S_scaffold_253_14
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12489..14018)
DNA (1530bp) protein (510aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; Flags: Precursor;; TaxID=891968 species="Bacteria; Sy
hypothetical protein
Ribonuclease Y
S_scaffold_253_15
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(14174..16246)
DNA (2073bp) protein (691aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EFD24312.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFD24312.1};; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Ana
ATP-dependent DNA helicase RecG (EC:3.6.1.-) rbh
ATP-dependent DNA helicase RecG
S_scaffold_253_16
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(16243..16440)
DNA (198bp) protein (66aa)
DivIVA domain-containing protein
DivIVA domain protein {ECO:0000313|EMBL:AFM21041.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain AT
DivIVA domain protein
Displaying 16 items

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