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SCN18_10_11_15_R5_P_scaffold_308

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R5_P_scaffold_308_1
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..807
DNA (807bp) protein (269aa)
gcvT; glycine cleavage system protein T (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
glycine cleavage system aminomethyltransferase T n=2 Tax=Fluoribacter dumoffii RepID=UPI0003645DE3
SCN18_10_11_15_R5_P_scaffold_308_2
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

842..1219
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=2 Tax=Legionella longbeachae RepID=D3HMQ8_LEGLN
gcvH; glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCN18_10_11_15_R5_P_scaffold_308_3
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1222..2589
DNA (1368bp) protein (456aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELR9_9GAMM
SCN18_10_11_15_R5_P_scaffold_308_4
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2591..2899
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELS0_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31905.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_5
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2893..4350
DNA (1458bp) protein (486aa)
gcsB; glycine dehydrogenase [decarboxylating] subunit 2 (glycine decarboxylase) (glycine cleavage system P-protein) (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713, ECO:0000313|EMBL:CBJ13757.1};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
glycine dehydrogenase subunit 2 n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C80EB
SCN18_10_11_15_R5_P_scaffold_308_6
unknown

Not on your lists

4363..4584
DNA (222bp) protein (74aa)

This feature has no annotations

SCN18_10_11_15_R5_P_scaffold_308_7
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4612..5259
DNA (648bp) protein (216aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CL94_MYXFH
Oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions {ECO:0000313|EMBL:CDI02246.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
alpha-ketoglutarate-dependent dioxygenase AlkB
SCN18_10_11_15_R5_P_scaffold_308_8
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5265..6311)
DNA (1047bp) protein (349aa)
Putative permease n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R0C2_OWEHD
putative permease
Putative permease {ECO:0000313|EMBL:AEV31582.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
SCN18_10_11_15_R5_P_scaffold_308_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6381..7361)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI0002DA2F61
Mg2+ and Co2+ transporter {ECO:0000313|EMBL:AHE66300.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
Magnesium/cobalt transport protein
SCN18_10_11_15_R5_P_scaffold_308_10
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7464..8291
DNA (828bp) protein (276aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|SAAS:SAAS00089008};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C819C
SCN18_10_11_15_R5_P_scaffold_308_11
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8288..8908
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELS3_9GAMM
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000313|EMBL:CDZ77189.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
phosphoglycerate mutase
SCN18_10_11_15_R5_P_scaffold_308_12
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9003..9521)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELS5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31910.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_13
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9535..10026)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELS5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31910.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_14
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10181..11548)
DNA (1368bp) protein (456aa)
putative Cysteine-S-conjugate beta-lyase (EC:4.4.1.13)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI0003612379
Tax=RIFCSPHIGHO2_12_FULL_Legionellales_37_14_curated
SCN18_10_11_15_R5_P_scaffold_308_15
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11665..13746
DNA (2082bp) protein (694aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI00035F7DA5
Aerobic respiration control sensor protein ArcB
Aerobic respiration control sensor protein ArcB {ECO:0000313|EMBL:CEG56166.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
SCN18_10_11_15_R5_P_scaffold_308_16
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13766..14641)
DNA (876bp) protein (292aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI0003771994
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_17
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14927..15199
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELS8_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31913.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_18
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15368..16171
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELS9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31914.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_19
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16236..17108
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELT1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31916.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
vipF; N-terminal GNAT family acetyltransferase
SCN18_10_11_15_R5_P_scaffold_308_20
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17222..18451
DNA (1230bp) protein (410aa)
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000313|EMBL:CEG55641.1}; EC=2.3.1.179 {ECO:0000313|EMBL:CEG55641.1};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
3-oxoacyl-ACP synthase n=1 Tax=Legionella shakespearei RepID=UPI0003782180
SCN18_10_11_15_R5_P_scaffold_308_21
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18594..19529
DNA (936bp) protein (312aa)
Universal stress protein E n=2 Tax=Legionella longbeachae RepID=D1RGN3_LEGLO
universal stress family protein
Putative universal stress family protein {ECO:0000313|EMBL:CBJ11308.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCN18_10_11_15_R5_P_scaffold_308_22
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19539..20984)
DNA (1446bp) protein (482aa)
algC; Phosphomannomutase/phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
Phosphomannomutase/phosphoglucomutase {ECO:0000313|EMBL:CEG57970.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CEG57970.1};; EC=5.4.2.8 {ECO:0000313|EMBL:CEG57970.1};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EL32_9GAMM
SCN18_10_11_15_R5_P_scaffold_308_23
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20977..28746)
DNA (7770bp) protein (2590aa)
Beta-ketoacyl synthase n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U9N1_CYAP2
Polyketide synthase family protein (fragment)
Polyketide synthase family protein {ECO:0000313|EMBL:CEG57969.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
SCN18_10_11_15_R5_P_scaffold_308_24
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29106..29807)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7E7E
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31923.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_25
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29822..30559)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EL35_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31924.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCN18_10_11_15_R5_P_scaffold_308_26
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(30606..31781)
DNA (1176bp) protein (392aa)
Multidrug resistance transporter, Bcr family n=1 Tax=Coxiella burnetii (strain Dugway 5J108-111) RepID=A9KDX4_COXBN
sugar (and other) transporter family protein
Sugar (And other) transporter family protein {ECO:0000313|EMBL:AJI52985.1}; TaxID=28110 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.;" source="Francisella philomiragia.;"
SCN18_10_11_15_R5_P_scaffold_308_27
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31951..33006
DNA (1056bp) protein (352aa)
lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase (EC:2.3.1.129)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C81A5
SCN18_10_11_15_R5_P_scaffold_308_28
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33003..35684
DNA (2682bp) protein (894aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
DNA polymerase n=4 Tax=Legionella pneumophila RepID=G8URD9_LEGPN
DNA polymerase I
SCN18_10_11_15_R5_P_scaffold_308_29
Sodalis glossinidius, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35715..35939)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Sodalis glossinidius (strain morsitans) RepID=Q2NTQ3_SODGM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAE74634.1}; TaxID=343509 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis glossinidius (strain morsitans).;"
Displaying 29 items

View Taxonomy